RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 METTL23Q86XA0 190 aa16.02■□□□□ 0.16
SS18-212ENST00000579061 NELFCDQ8IXH7 590 aa16.02■□□□□ 0.16
SS18-212ENST00000579061 LRRC52Q8N7C0 313 aa16.02■□□□□ 0.16
SS18-212ENST00000579061 C1orf127Q8N9H9 656 aa16.02■□□□□ 0.16
SS18-212ENST00000579061 GOLGA5Q8TBA6 731 aa16.02■□□□□ 0.16
SS18-212ENST00000579061 BORCS6Q96GS4 357 aa16.02■□□□□ 0.16
SS18-212ENST00000579061 MFSD14AQ96MC6 490 aa16.02■□□□□ 0.16
SS18-212ENST00000579061 KCNK12Q9HB15 430 aa16.02■□□□□ 0.16
SS18-212ENST00000579061 PDE11AQ9HCR9 933 aa16.02■□□□□ 0.16
SS18-212ENST00000579061 INTS13Q9NVM9 706 aa16.02■□□□□ 0.16
SS18-212ENST00000579061 DNMT3BQ9UBC3 853 aaKnown RBP16.02■□□□□ 0.16
SS18-212ENST00000579061 POLIQ9UNA4 740 aa16.02■□□□□ 0.16
SS18-212ENST00000579061 INSL5Q9Y5Q6 135 aa16.02■□□□□ 0.16
SS18-212ENST00000579061 ZNF318Q5VUA4 2279 aa16.02■□□□□ 0.15
SS18-212ENST00000579061 KPNA7A9QM74 516 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 CYB561D2O14569 222 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 SEC24AO95486 1093 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 ITGB3P05106 788 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 TMEM191BP0C7N4 346 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 PTPN2P17706 415 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 ADCY1Q08828 1119 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 STK4Q13043 487 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 TDGQ13569 410 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 PABPC1LQ4VXU2 614 aaKnown RBP16.01■□□□□ 0.15
SS18-212ENST00000579061 RNF19BQ6ZMZ0 732 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 KRBA2Q6ZNG9 492 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 HFE2Q6ZVN8 426 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 CBWD2Q8IUF1 395 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 XXYLT1Q8NBI6 393 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 CXorf38Q8TB03 319 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 NOC3LQ8WTT2 800 aaKnown RBP16.01■□□□□ 0.15
SS18-212ENST00000579061 CCDC47Q96A33 483 aaKnown RBP16.01■□□□□ 0.15
SS18-212ENST00000579061 ASIC4Q96FT7 647 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 CCDC34Q96HJ3 373 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 ANKRD36BP1Q96IX9 119 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 HSFX1Q9UBD0 423 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 CDH7Q9ULB5 785 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 AGAP1Q9UPQ3 857 aa16.01■□□□□ 0.15
SS18-212ENST00000579061 ARIH1Q9Y4X5 557 aaPredicted RBP16.01■□□□□ 0.15
SS18-212ENST00000579061 CLIC2O15247 247 aa16■□□□□ 0.15
SS18-212ENST00000579061 PRPF40AO75400 957 aaKnown RBP16■□□□□ 0.15
SS18-212ENST00000579061 ZNF202O95125 648 aa16■□□□□ 0.15
SS18-212ENST00000579061 POLR2BP30876 1174 aaKnown RBP16■□□□□ 0.15
SS18-212ENST00000579061 NTHL1P78549 312 aa16■□□□□ 0.15
SS18-212ENST00000579061 RBP5P82980 135 aa16■□□□□ 0.15
SS18-212ENST00000579061 SNRNP35Q16560 246 aaKnown RBP16■□□□□ 0.15
SS18-212ENST00000579061 DUOXA2Q1HG44 320 aa16■□□□□ 0.15
SS18-212ENST00000579061 WDR49Q8IV35 697 aa16■□□□□ 0.15
SS18-212ENST00000579061 THEM5Q8N1Q8 247 aa16■□□□□ 0.15
SS18-212ENST00000579061 ELMOD1Q8N336 334 aa16■□□□□ 0.15
SS18-212ENST00000579061 CSGALNACT2Q8N6G5 542 aa16■□□□□ 0.15
SS18-212ENST00000579061 KIAA0895Q8NCT3 520 aa16■□□□□ 0.15
SS18-212ENST00000579061 SPATA18Q8TC71 538 aa16■□□□□ 0.15
SS18-212ENST00000579061 TMEM174Q8WUU8 243 aa16■□□□□ 0.15
SS18-212ENST00000579061 GOLPH3LQ9H4A5 285 aa16■□□□□ 0.15
SS18-212ENST00000579061 GDPD2Q9HCC8 539 aa16■□□□□ 0.15
SS18-212ENST00000579061 HCFC1R1Q9NWW0 138 aa16■□□□□ 0.15
SS18-212ENST00000579061 DUSP12Q9UNI6 340 aa16■□□□□ 0.15
SS18-212ENST00000579061 HCN4Q9Y3Q4 1203 aa16■□□□□ 0.15
SS18-212ENST00000579061 ZDBF2Q9HCK1 2354 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 ANHXE9PGG2 379 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 MICAL2O94851 1124 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 RHOBTB3O94955 611 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 KIF20AO95235 890 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 VNN2O95498 520 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 TNNC2P02585 160 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 RPN1P04843 607 aaKnown RBP15.99■□□□□ 0.15
SS18-212ENST00000579061 RHOP08100 348 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 OR4Q2P0C623 313 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 SMARCB1Q12824 385 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 DPYDQ12882 1025 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 PLD1Q13393 1074 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 PSMD6Q15008 389 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 TMEM86AQ8N2M4 240 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 LEMD2Q8NC56 503 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 FGF13Q92913 245 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 PBXIP1Q96AQ6 731 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 MTMR12Q9C0I1 747 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 GDAP2Q9NXN4 497 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 SIX4Q9UIU6 781 aa15.99■□□□□ 0.15
SS18-212ENST00000579061 MRPS23Q9Y3D9 190 aaKnown RBP15.99■□□□□ 0.15
SS18-212ENST00000579061 R3HCC1Q9Y3T6 440 aaKnown RBP15.99■□□□□ 0.15
SS18-212ENST00000579061 MTMR11A4FU01 709 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 PDXKO00764 312 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 ZNF197O14709 1029 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 CYP2J2P51589 502 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 CYP24A1Q07973 514 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 MYO1EQ12965 1108 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 HTR4Q13639 388 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 KCNB1Q14721 858 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 WSCD1Q658N2 575 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 IQCEQ6IPM2 695 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 CENPPQ6IPU0 288 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 MTSS1LQ765P7 747 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 SLC9A9Q8IVB4 645 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 FBXL6Q8N531 539 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 OR10T2Q8NGX3 314 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 ITFG1Q8TB96 612 aa15.98■□□□□ 0.15
SS18-212ENST00000579061 C2orf15Q8WU43 125 aaKnown RBP15.98■□□□□ 0.15
SS18-212ENST00000579061 ZNF512Q96ME7 567 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms