RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 CRELD2Q6UXH1 353 aaPredicted RBP12.49□□□□□ -0.41
SSH2-208ENST00000579040 ST13P5Q8NFI4 369 aaPredicted RBP12.49□□□□□ -0.41
SSH2-208ENST00000579040 PJA1Q8NG27 643 aa12.49□□□□□ -0.41
SSH2-208ENST00000579040 ELSPBP1Q96BH3 223 aa12.49□□□□□ -0.41
SSH2-208ENST00000579040 TCEAL4Q96EI5 215 aa12.49□□□□□ -0.41
SSH2-208ENST00000579040 DDX23Q9BUQ8 820 aaKnown RBP12.49□□□□□ -0.41
SSH2-208ENST00000579040 LRRC27Q9C0I9 530 aa12.49□□□□□ -0.41
SSH2-208ENST00000579040 CUEDC2Q9H467 287 aa12.49□□□□□ -0.41
SSH2-208ENST00000579040 DPP3Q9NY33 737 aa12.49□□□□□ -0.41
SSH2-208ENST00000579040 CEP72Q9P209 647 aa12.49□□□□□ -0.41
SSH2-208ENST00000579040 SIT1Q9Y3P8 196 aa12.49□□□□□ -0.41
SSH2-208ENST00000579040 TICRRQ7Z2Z1 1910 aa12.49□□□□□ -0.41
SSH2-208ENST00000579040 COL4A2P08572 1712 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 SPTLC1O15269 473 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 VNN2O95498 520 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 LDHAP00338 332 aaKnown RBP12.48□□□□□ -0.41
SSH2-208ENST00000579040 CCR2P41597 374 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 TAF6P49848 677 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 EPHB3P54753 998 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 SLC44A4Q53GD3 710 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 CENPPQ6IPU0 288 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 STXBP4Q6ZWJ1 553 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 METTL23Q86XA0 190 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 BRSK2Q8IWQ3 736 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 CCDC65Q8IXS2 484 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 DNASE1L2Q92874 299 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 ZNF560Q96MR9 790 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 ASB16Q96NS5 453 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 OSBPL6Q9BZF3 934 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 GPR88Q9GZN0 384 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 TNMDQ9H2S6 317 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 ZFP14Q9HCL3 533 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 PANK4Q9NVE7 773 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 TBC1D7Q9P0N9 293 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 DLGAP2Q9P1A6 1054 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 ASB3Q9Y575 518 aa12.48□□□□□ -0.41
SSH2-208ENST00000579040 ZNF638Q14966 1978 aaKnown RBP12.48□□□□□ -0.41
SSH2-208ENST00000579040 KANSL1LA0AUZ9 987 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 MTMR11A4FU01 709 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 KIAA0391O15091 583 aaKnown RBP12.47□□□□□ -0.41
SSH2-208ENST00000579040 CUTAO60888 179 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 FGF19O95750 216 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 OR4Q2P0C623 313 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 MYL4P12829 197 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 FCARP24071 287 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 PNPLA4P41247 253 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 MAGEA9P43362 315 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 ALDH1A3P47895 512 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 CASP5P51878 434 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 KCNA1Q09470 495 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 SMARCB1Q12824 385 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 DUSP4Q13115 394 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 SNW1Q13573 536 aaKnown RBP12.47□□□□□ -0.41
SSH2-208ENST00000579040 SV2CQ496J9 727 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 FAM78AQ5JUQ0 283 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 TANGO2Q6ICL3 276 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 HSCBQ8IWL3 235 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 EFCAB13Q8IY85 973 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 HS6ST3Q8IZP7 471 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 SYCP3Q8IZU3 236 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 PDILTQ8N807 584 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 SMARCD2Q92925 531 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 PGLYRP2Q96PD5 576 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 FAM213AQ9BRX8 229 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 PANK2Q9BZ23 570 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 IKZF4Q9H2S9 585 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 TMEM206Q9H813 350 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 TRPV4Q9HBA0 871 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 KBTBD4Q9NVX7 518 aa12.47□□□□□ -0.41
SSH2-208ENST00000579040 CYB561D2O14569 222 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 MOSPD3O75425 235 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 DCNP07585 359 aaKnown RBP12.46□□□□□ -0.41
SSH2-208ENST00000579040 HSP90AA1P07900 732 aaKnown RBP12.46□□□□□ -0.41
SSH2-208ENST00000579040 AMPD3Q01432 767 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 E2F4Q16254 413 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 CNNM4Q6P4Q7 775 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 POTEHQ6S545 545 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 FRMD5Q7Z6J6 570 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 ITIH5Q86UX2 942 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 THEM5Q8N1Q8 247 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 ATAD1Q8NBU5 361 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 OR10T2Q8NGX3 314 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 SHKBP1Q8TBC3 707 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 C2orf15Q8WU43 125 aaKnown RBP12.46□□□□□ -0.41
SSH2-208ENST00000579040 CACTINQ8WUQ7 758 aaKnown RBP12.46□□□□□ -0.41
SSH2-208ENST00000579040 DEPDC1BQ8WUY9 529 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 NKD2Q969F2 451 aaPredicted RBP12.46□□□□□ -0.41
SSH2-208ENST00000579040 PSMG2Q969U7 264 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 E2F7Q96AV8 911 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 NELL2Q99435 816 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 PYM1Q9BRP8 204 aaKnown RBP12.46□□□□□ -0.41
SSH2-208ENST00000579040 LRRC3Q9BY71 257 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 PLA2G2FQ9BZM2 168 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 FOXQ1Q9C009 403 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 ZCWPW1Q9H0M4 648 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 DNAJC25Q9H1X3 360 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 CRISPLD1Q9H336 500 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 SEMA4AQ9H3S1 761 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 MAGEF1Q9HAY2 307 aa12.46□□□□□ -0.41
SSH2-208ENST00000579040 RBAKQ9NYW8 714 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms