RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 GYPCP04921 128 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 URODP06132 367 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 KRT9P35527 623 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 OR1G1P47890 313 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 NPTX2P47972 431 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 CETN1Q12798 172 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 TARBP2Q15633 366 aaKnown RBP10.98□□□□□ -0.65
SS18-210ENST00000578700 DCAF17Q5H9S7 520 aaPredicted RBP10.98□□□□□ -0.65
SS18-210ENST00000578700 MIIPQ5JXC2 388 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 TCERG1LQ5VWI1 586 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 CYP26C1Q6V0L0 522 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 AGMOQ6ZNB7 445 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 C15orf39Q6ZRI6 1047 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 CACNA2D4Q7Z3S7 1137 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 PALB2Q86YC2 1186 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 TMTC1Q8IUR5 882 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 SLC9A9Q8IVB4 645 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 GLYCTKQ8IVS8 523 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 TRIM59Q8IWR1 403 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 TC2NQ8N9U0 490 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 OR8K1Q8NGG5 319 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 DEPTORQ8TB45 409 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 GPR152Q8TDT2 470 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 RSPH1Q8WYR4 309 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 SMG7Q92540 1137 aaKnown RBP10.98□□□□□ -0.65
SS18-210ENST00000578700 BICD1Q96G01 975 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 MYADMQ96S97 322 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 NTPCRQ9BSD7 190 aaKnown RBP10.98□□□□□ -0.65
SS18-210ENST00000578700 EDEM3Q9BZQ6 932 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 NUCKS1Q9H1E3 243 aaKnown RBP10.98□□□□□ -0.65
SS18-210ENST00000578700 SEMA4AQ9H3S1 761 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 RSAD1Q9HA92 442 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 GPRC5CQ9NQ84 441 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 SPTLC3Q9NUV7 552 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 CAPN11Q9UMQ6 739 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 TBX20Q9UMR3 447 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 SIT1Q9Y3P8 196 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 TEX28O15482 410 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 TGFB1I1O43294 461 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 LILRB3O75022 631 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 ZNF623O75123 536 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 PPP1R37O75864 691 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 STBD1O95210 358 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 IPO7O95373 1038 aaKnown RBP10.97□□□□□ -0.65
SS18-210ENST00000578700 GLUD1P00367 558 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 SRGAP2CP0DJJ0 459 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 HOXD13P35453 343 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 NAMPTP43490 491 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 RAB27AP51159 221 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 CYP2J2P51589 502 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 ZBED6P86452 979 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 INTS8Q75QN2 995 aaKnown RBP10.97□□□□□ -0.65
SS18-210ENST00000578700 GET4Q7L5D6 327 aaPredicted RBP10.97□□□□□ -0.65
SS18-210ENST00000578700 ZNF410Q86VK4 478 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 C12orf56Q8IXR9 622 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 XXYLT1Q8NBI6 393 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 FIZ1Q96SL8 496 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 TRAIPQ9BWF2 469 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 STRA6Q9BX79 667 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 WDR6Q9NNW5 1121 aaKnown RBP10.97□□□□□ -0.65
SS18-210ENST00000578700 ABHD10Q9NUJ1 306 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 CACNA1IQ9P0X4 2223 aa10.97□□□□□ -0.65
SS18-210ENST00000578700 KMT2BQ9UMN6 2715 aaPredicted RBP10.96□□□□□ -0.65
SS18-210ENST00000578700 ZMYM2Q9UBW7 1377 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 CLUHO75153 1309 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 LRRIQ4A6NIV6 560 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 MAFO75444 373 aaPredicted RBP10.96□□□□□ -0.65
SS18-210ENST00000578700 AKAP3O75969 853 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 SOD2P04179 222 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 TUBB4AP04350 444 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 ADH1AP07327 375 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 SP9P0CG40 484 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 SRFP11831 508 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 EFNA5P52803 228 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 KCNA1Q09470 495 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 KCNH2Q12809 1159 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 TFDP1Q14186 410 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 MXD4Q14582 209 aaPredicted RBP10.96□□□□□ -0.65
SS18-210ENST00000578700 PUM1Q14671 1186 aaKnown RBP eCLIP10.96□□□□□ -0.65
SS18-210ENST00000578700 ELMSAN1Q6PJG2 1045 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 ZC3H14Q6PJT7 736 aaKnown RBP10.96□□□□□ -0.65
SS18-210ENST00000578700 MAP4K3Q8IVH8 894 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 C1orf210Q8IVY1 113 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 TMEM161BQ8NDZ6 487 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 TMEM174Q8WUU8 243 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 RPS6KC1Q96S38 1066 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 TMEM175Q9BSA9 504 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 APOL6Q9BWW8 343 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 FOXQ1Q9C009 403 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 DHX33Q9H6R0 707 aaKnown RBP10.96□□□□□ -0.65
SS18-210ENST00000578700 KCND1Q9NSA2 647 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 KANSL3Q9P2N6 904 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 STK39Q9UEW8 545 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 SSX2IPQ9Y2D8 614 aa10.96□□□□□ -0.65
SS18-210ENST00000578700 IGKV6-21A0A0C4DH24 114 aa10.95□□□□□ -0.66
SS18-210ENST00000578700 TTC26A0AVF1 554 aa10.95□□□□□ -0.66
SS18-210ENST00000578700 K7ERI5 159 aa10.95□□□□□ -0.66
SS18-210ENST00000578700 HNRNPDLO14979 420 aaKnown RBP10.95□□□□□ -0.66
SS18-210ENST00000578700 KIAA0391O15091 583 aaKnown RBP10.95□□□□□ -0.66
SS18-210ENST00000578700 MAPK13O15264 365 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms