RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 DSC1Q08554 894 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 INCA1Q0VD86 236 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 BMS1Q14692 1282 aaKnown RBP14.35□□□□□ -0.11
SRSF1-202ENST00000578430 UPP1Q16831 310 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 ASTE1Q2TB18 679 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-202ENST00000578430 DCLRE1AQ6PJP8 1040 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 RAD9BQ6WBX8 426 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 LIMS2Q7Z4I7 341 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 TXLNBQ8N3L3 684 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 TOP6BLQ8N6T0 577 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 SPATA18Q8TC71 538 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 CASD1Q96PB1 797 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 FAM193BQ96PV7 902 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-202ENST00000578430 ARID3AQ99856 593 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 HAUS4Q9H6D7 363 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 GOLGA2P5Q9HBQ8 144 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 LUC7LQ9NQ29 371 aaKnown RBP14.35□□□□□ -0.11
SRSF1-202ENST00000578430 PYCARDQ9ULZ3 195 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 POLIQ9UNA4 740 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 SNX9Q9Y5X1 595 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 LTBP2Q14767 1821 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 TDRD15B5MCY1 1934 aaKnown RBP14.35□□□□□ -0.11
SRSF1-202ENST00000578430 ALPK3Q96L96 1907 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 CARNS1A5YM72 827 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 TMEM189-UBE2V1I3L0A0 370 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 PPEF2O14830 753 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 CYP26A1O43174 497 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 ZSCAN12O43309 604 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 HUS1O60921 280 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 PAEPP09466 180 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 WEE2P0C1S8 567 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 FGFR1P11362 822 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 MSNP26038 577 aaKnown RBP14.34□□□□□ -0.11
SRSF1-202ENST00000578430 PDE6CP51160 858 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 CLCNKBP51801 687 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 KIF11P52732 1056 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 ZNF132P52740 706 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 FPGSQ05932 587 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 SPA17Q15506 151 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 SLC18A3Q16572 532 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 C10orf76Q5T2E6 689 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 TMEM270Q6UE05 265 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 SCARA5Q6ZMJ2 495 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 ZNF571Q7Z3V5 609 aaPredicted RBP14.34□□□□□ -0.11
SRSF1-202ENST00000578430 UNC93AQ86WB7 457 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 C7orf61Q8IZ16 206 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 RBBP8NLQ8NC74 664 aaPredicted RBP14.34□□□□□ -0.11
SRSF1-202ENST00000578430 EPS8L1Q8TE68 723 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 TOP1MTQ969P6 601 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 ELMO3Q96BJ8 720 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 MMS19Q96T76 1030 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 PRO3102Q9H379 93 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 TBC1D13Q9NVG8 400 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.34□□□□□ -0.11
SRSF1-202ENST00000578430 KIAA1257Q9ULG3 409 aa14.34□□□□□ -0.11
SRSF1-202ENST00000578430 BARX2Q9UMQ3 279 aaPredicted RBP14.34□□□□□ -0.11
SRSF1-202ENST00000578430 SCN1AP35498 2009 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 CASTOR2A6NHX0 329 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 RBAK-RBAKDNI3L0D1 243 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 CILPO75339 1184 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 FGBP02675 491 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 CCDC175P0C221 793 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 PNMA6AP0CW24 399 aaPredicted RBP14.33□□□□□ -0.12
SRSF1-202ENST00000578430 CYP11B1P15538 503 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 TNFAIP3P21580 790 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 AARSP49588 968 aaKnown RBP eCLIP14.33□□□□□ -0.12
SRSF1-202ENST00000578430 PSRC1Q6PGN9 363 aaPredicted RBP14.33□□□□□ -0.12
SRSF1-202ENST00000578430 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.33□□□□□ -0.122e-6■□□□□ 8.8
SRSF1-202ENST00000578430 COLGALT2Q8IYK4 626 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 TMEM86AQ8N2M4 240 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 APPL2Q8NEU8 664 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 AGPAT1Q99943 283 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 TMEM175Q9BSA9 504 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 SYT11Q9BT88 431 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 SMYD3Q9H7B4 428 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 NOCTQ9UK39 431 aaKnown RBP14.33□□□□□ -0.12
SRSF1-202ENST00000578430 ADGRG1Q9Y653 693 aa14.33□□□□□ -0.12
SRSF1-202ENST00000578430 COL6A3P12111 3177 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 GOLGA6L9A6NEM1 432 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 ESPNB1AK53 854 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 SPTLC1O15269 473 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 DGKIO75912 1065 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 B3GAT3O94766 335 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 PLEKP08567 350 aaPredicted RBP14.32□□□□□ -0.12
SRSF1-202ENST00000578430 CD58P19256 250 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 WARSP23381 471 aaKnown RBP14.32□□□□□ -0.12
SRSF1-202ENST00000578430 WDR5P61964 334 aaKnown RBP14.32□□□□□ -0.12
SRSF1-202ENST00000578430 CDR2Q01850 454 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 MTF1Q14872 753 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 PPP1R2P3Q6NXS1 205 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 DSTYKQ6XUX3 929 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 TRIM72Q6ZMU5 477 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 LRRC43Q8N309 656 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 TMEM130Q8N3G9 435 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 BADQ92934 168 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 SENP8Q96LD8 212 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 SDCBP2Q9H190 292 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 DSEQ9UL01 958 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 NR2E3Q9Y5X4 410 aa14.32□□□□□ -0.12
SRSF1-202ENST00000578430 ATP8B3O60423 1300 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms