RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 GTF2F1P35269 517 aaKnown RBP eCLIP10.84□□□□□ -0.67
CRLF3-202ENST00000577725 GRM5P41594 1212 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 PIK3CAP42336 1068 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 MCCD1P59942 119 aaPredicted RBP10.84□□□□□ -0.67
CRLF3-202ENST00000577725 ZBED6P86452 979 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 TFAMQ00059 246 aaKnown RBP10.84□□□□□ -0.67
CRLF3-202ENST00000577725 NCBP1Q09161 790 aaKnown RBP10.84□□□□□ -0.67
CRLF3-202ENST00000577725 RAPGEF1Q13905 1077 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 MBTPS1Q14703 1052 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 MTF1Q14872 753 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 SLC10A6Q3KNW5 377 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 HS1BP3Q53T59 392 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 FAM26DQ5JW98 314 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 KRT39Q6A163 491 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 TWF2Q6IBS0 349 aaKnown RBP10.84□□□□□ -0.67
CRLF3-202ENST00000577725 JADE1Q6IE81 842 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 TRAF7Q6Q0C0 670 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 CACNA2D4Q7Z3S7 1137 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 CNGA4Q8IV77 575 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 KAT5Q92993 513 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 ACAP3Q96P50 834 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 PANX2Q96RD6 677 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 TRIM6Q9C030 488 aaPredicted RBP10.84□□□□□ -0.67
CRLF3-202ENST00000577725 MTMR12Q9C0I1 747 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 RNF39Q9H2S5 420 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 PLCB1Q9NQ66 1216 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 ABHD10Q9NUJ1 306 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 KLK14Q9P0G3 267 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 CEP72Q9P209 647 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 ZKSCAN5Q9Y2L8 839 aa10.84□□□□□ -0.67
CRLF3-202ENST00000577725 USP15Q9Y4E8 981 aaPredicted RBP10.84□□□□□ -0.67
CRLF3-202ENST00000577725 ANKRD11Q6UB99 2663 aaPredicted RBP10.84□□□□□ -0.67
CRLF3-202ENST00000577725 WDR87Q6ZQQ6 2873 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 SOWAHDA6NJG2 315 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 P4HA2O15460 535 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 MGEA5O60502 916 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 NBNO60934 754 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 PHACTR2O75167 634 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 RECQL4O94761 1208 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 CLSTN1O94985 981 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 IL18RAPO95256 599 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 AMHP03971 560 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 ADRB1P08588 477 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 UCHL3P15374 230 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 AKAP5P24588 427 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 GTF2H1P32780 548 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 CLCN5P51795 746 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 PAK2Q13177 524 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 HSP90AA2PQ14568 343 aaPredicted RBP10.83□□□□□ -0.68
CRLF3-202ENST00000577725 ANGPT1Q15389 498 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 ARHGAP44Q17R89 818 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 TCTN1Q2MV58 587 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 ZACNQ401N2 412 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 FIGNQ5HY92 759 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 SPOPLQ6IQ16 392 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 PHLDB3Q6NSJ2 640 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 C15orf39Q6ZRI6 1047 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 LRRC8DQ7L1W4 858 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 USP37Q86T82 979 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 UBALD2Q8IYN6 164 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 ZNF710Q8N1W2 664 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 SMG8Q8ND04 991 aaKnown RBP10.83□□□□□ -0.68
CRLF3-202ENST00000577725 RUBCNQ92622 972 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 TATDN2Q93075 761 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 YME1L1Q96TA2 773 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 BAG1Q99933 345 aaPredicted RBP10.83□□□□□ -0.68
CRLF3-202ENST00000577725 CCDC94Q9BW85 323 aaPredicted RBP10.83□□□□□ -0.68
CRLF3-202ENST00000577725 TMX1Q9H3N1 280 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 PARP2Q9UGN5 583 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 DNAJC12Q9UKB3 198 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 PADI3Q9ULW8 664 aa10.83□□□□□ -0.68
CRLF3-202ENST00000577725 MAP1BP46821 2468 aaKnown RBP10.82□□□□□ -0.68
CRLF3-202ENST00000577725 MEIS3P2A8K0S8 358 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 TNNC2P02585 160 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 PLEKP08567 350 aaPredicted RBP10.82□□□□□ -0.68
CRLF3-202ENST00000577725 TMEM191BP0C7N4 346 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 ATF7P17544 494 aaPredicted RBP10.82□□□□□ -0.68
CRLF3-202ENST00000577725 CLDN10P78369 228 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 ARID5AQ03989 594 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 ENPEPQ07075 957 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 DMWDQ09019 674 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 CETN1Q12798 172 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 MTMR3Q13615 1198 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 PCBP1Q15365 356 aaKnown RBP eCLIP10.82□□□□□ -0.68
CRLF3-202ENST00000577725 ASIC2Q16515 512 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 GLRA4Q5JXX5 417 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 WDR59Q6PJI9 974 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 RAD9BQ6WBX8 426 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.82□□□□□ -0.68
CRLF3-202ENST00000577725 TRAPPC11Q7Z392 1133 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 APBB1IPQ7Z5R6 666 aaPredicted RBP10.82□□□□□ -0.68
CRLF3-202ENST00000577725 ZSCAN30Q86W11 494 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 WDR49Q8IV35 697 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 FBXL13Q8NEE6 735 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 ZNF397Q8NF99 534 aaPredicted RBP10.82□□□□□ -0.68
CRLF3-202ENST00000577725 OR8K1Q8NGG5 319 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 LPPQ93052 612 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 PPP2R3CQ969Q6 453 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 CCDC51Q96ER9 411 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 KIF12Q96FN5 646 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms