RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 SNX9Q9Y5X1 595 aa11.45□□□□□ -0.58
RNF43-203ENST00000577716 SNRPAP09012 282 aaKnown RBP11.44□□□□□ -0.58
RNF43-203ENST00000577716 NQO1P15559 274 aaKnown RBP11.44□□□□□ -0.58
RNF43-203ENST00000577716 PAMP19021 973 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 AMPD2Q01433 879 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 OVGP1Q12889 678 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 RIC1Q4ADV7 1423 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 PACS2Q86VP3 889 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 DNAJC9Q8WXX5 260 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 PGBD4Q96DM1 585 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 FSD1LQ9BXM9 530 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 WHRNQ9P202 907 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 TNS2Q63HR2 1409 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 GOLGA8CPA6NN73 597 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 NVLO15381 856 aaKnown RBP11.44□□□□□ -0.58
RNF43-203ENST00000577716 MAFGO15525 162 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 PBX1P40424 430 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 CPA2P48052 419 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 SKOR1P84550 965 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 TKFCQ3LXA3 575 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 Q4G0T1 1027 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 LRRC55Q6ZSA7 311 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 LCA5Q86VQ0 697 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 MTMR9Q96QG7 549 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 C17orf75Q9HAS0 396 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 PHTF1Q9UMS5 762 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 REXO2Q9Y3B8 237 aaKnown RBP11.44□□□□□ -0.58
RNF43-203ENST00000577716 ENO4A6NNW6 628 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 H3BRJ5 948 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 S100BP04271 92 aaPredicted RBP11.44□□□□□ -0.58
RNF43-203ENST00000577716 RXRBP28702 533 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 NPTX2P47972 431 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 PHEXP78562 749 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 CUL2Q13617 745 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 MXD4Q14582 209 aaPredicted RBP11.44□□□□□ -0.58
RNF43-203ENST00000577716 SEZ6Q53EL9 994 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 SPOUT1Q5T280 376 aaKnown RBP11.44□□□□□ -0.58
RNF43-203ENST00000577716 CYP4A22Q5TCH4 519 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 SV2AQ7L0J3 742 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 PPIL6Q8IXY8 311 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 NDUFAF2Q8N183 169 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 FAM71DQ8N9W8 422 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 CEP70Q8NHQ1 597 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 SCG3Q8WXD2 468 aaKnown RBP11.44□□□□□ -0.58
RNF43-203ENST00000577716 PRMT6Q96LA8 375 aaPredicted RBP11.44□□□□□ -0.58
RNF43-203ENST00000577716 RSAD1Q9HA92 442 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 PAK5Q9P286 719 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 ZNRF3Q9ULT6 936 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 TAL1P17542 331 aaPredicted RBP11.44□□□□□ -0.58
RNF43-203ENST00000577716 MUTP22033 750 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 SHMT1P34896 483 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 IRF2BP1Q8IU81 584 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 ICA1LQ8NDH6 482 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 ATG4CQ96DT6 458 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 STAMBPL1Q96FJ0 436 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 DNAJC5Q9H3Z4 198 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 MANSC1Q9H8J5 431 aa11.44□□□□□ -0.58
RNF43-203ENST00000577716 MTO1Q9Y2Z2 717 aaKnown RBP11.44□□□□□ -0.58
RNF43-203ENST00000577716 TTC36A6NLP5 189 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 SPAG6O75602 509 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 APOEP02649 317 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 LCP1P13796 627 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 PAPOLAP51003 745 aaKnown RBP11.43□□□□□ -0.58
RNF43-203ENST00000577716 GEMIN4P57678 1058 aaKnown RBP11.43□□□□□ -0.58
RNF43-203ENST00000577716 ARID3BQ8IVW6 561 aaPredicted RBP11.43□□□□□ -0.58
RNF43-203ENST00000577716 SLC5A5Q92911 643 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 GMCL1Q96IK5 515 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 ZDHHC15Q96MV8 337 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 TRPV6Q9H1D0 765 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 MRPL46Q9H2W6 279 aaKnown RBP11.43□□□□□ -0.58
RNF43-203ENST00000577716 FAM86B1E9PN63 330 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 CHEK2O96017 543 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 FAM86B2P0C5J1 330 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 CTCFP49711 727 aaPredicted RBP11.43□□□□□ -0.58
RNF43-203ENST00000577716 SATB1Q01826 763 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 DNAL1Q4LDG9 190 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 FASTKD1Q53R41 847 aaKnown RBP11.43□□□□□ -0.58
RNF43-203ENST00000577716 TTMPQ5BVD1 217 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 CDR2LQ86X02 465 aaPredicted RBP11.43□□□□□ -0.58
RNF43-203ENST00000577716 ABI1Q8IZP0 508 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 FGD4Q96M96 766 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 SIK2Q9H0K1 926 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 HAO1Q9UJM8 370 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 SUFUQ9UMX1 484 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 TRIM49D1C9J1S8 452 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 SMAPO00193 183 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 CES2O00748 559 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 PSTPIP1O43586 416 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 TXNP10599 105 aaKnown RBP11.43□□□□□ -0.58
RNF43-203ENST00000577716 ARPP19P56211 112 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 EVX2Q03828 476 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 C11orf63Q6NUN7 778 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 NLRP9Q7RTR0 991 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 MSL3Q8N5Y2 521 aaKnown RBP11.43□□□□□ -0.58
RNF43-203ENST00000577716 TSPYL2Q9H2G4 693 aaPredicted RBP11.43□□□□□ -0.58
RNF43-203ENST00000577716 KDM4CQ9H3R0 1056 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 SUN2Q9UH99 717 aa11.43□□□□□ -0.58
RNF43-203ENST00000577716 VIRMAQ69YN4 1812 aaKnown RBP11.42□□□□□ -0.58
RNF43-203ENST00000577716 RNF103-CHMP3A0A140T963 221 aa11.42□□□□□ -0.58
RNF43-203ENST00000577716 ICAM1P05362 532 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms