RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 CLEC1BQ9P126 229 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CDY1Q9Y6F8 540 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 A0A0C4DFX4 3053 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 UNC80Q8N2C7 3258 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 BDP1A6H8Y1 2624 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TGM5O43548 720 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 FGFR1OPO95684 399 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 STAU1O95793 577 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ATICP31939 592 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 GTF2H1P32780 548 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 OR1D2P34982 312 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 PMS1P54277 932 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ITIH3Q06033 890 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 DLX2Q07687 328 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TJAP1Q5JTD0 557 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CCDC183Q5T5S1 534 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TPGS2Q68CL5 300 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TTI2Q6NXR4 508 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 PALB2Q86YC2 1186 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 GLYCTKQ8IVS8 523 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 THEM5Q8N1Q8 247 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TMEM86AQ8N2M4 240 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TOP6BLQ8N6T0 577 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 SMRP1Q8NCR6 262 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 KREMEN2Q8NCW0 462 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 PLEKHO2Q8TD55 490 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 SYAP1Q96A49 352 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 FAM84AQ96KN4 292 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ASB2Q96Q27 587 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 METTL14Q9HCE5 456 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 MAN1C1Q9NR34 630 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 GDAP2Q9NXN4 497 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ARMCX3Q9UH62 379 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 FBXL5Q9UKA1 691 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 FBXW11Q9UKB1 542 aa13.67□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TBC1D4O60343 1298 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CLSTN1O94985 981 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 GNA14O95837 355 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CPB1P15086 417 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 NLRP12P59046 1061 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TNNC1P63316 161 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 RBM10P98175 930 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ROR1Q01973 937 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 NCOA4Q13772 614 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CLUL1Q15846 466 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ZACNQ401N2 412 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CCDC40Q4G0X9 1142 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TDRD10Q5VZ19 366 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 PTCRAQ6ISU1 281 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CES5AQ6NT32 575 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 RBM43Q6ZSC3 357 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 RTL10Q7L3V2 364 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 DPH6Q7L8W6 267 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CMASQ8NFW8 434 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 BORCS6Q96GS4 357 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 IMPG2Q9BZV3 1241 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 RWDD2AQ9UIY3 292 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 MAFFQ9ULX9 164 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TIMM13Q9Y5L4 95 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 SNX9Q9Y5X1 595 aa13.66□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ADAM12O43184 909 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 C4BPAP04003 597 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TRIM49P0CI25 452 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TRIM49CP0CI26 452 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 P4HA1P13674 534 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ELF1P32519 619 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 PIK3CAP42336 1068 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 MXI1P50539 228 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 STX17P56962 302 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 MCCD1P59942 119 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 DLG4P78352 724 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 MYL7Q01449 175 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TSPY1Q01534 308 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ZNF699Q32M78 642 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CT47A1Q5JQC4 288 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TCERG1LQ5VWI1 586 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 WSCD1Q658N2 575 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 LILRA6Q6PI73 481 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 SYCE2Q6PIF2 218 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CYP26C1Q6V0L0 522 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CCDC149Q6ZUS6 474 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 SV2AQ7L0J3 742 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 FRMD5Q7Z6J6 570 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 FILIP1Q7Z7B0 1213 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ADGRF2Q8IZF7 708 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CCDC150Q8NCX0 1101 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ZNF461Q8TAF7 563 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ZNF516Q92618 1163 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TAF4BQ92750 862 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 EEF2KMTQ96G04 330 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 RIPOR3Q96MK2 946 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 NECTIN4Q96NY8 510 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 DUSP9Q99956 384 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 RHOBTB2Q9BYZ6 727 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 VRTNQ9H8Y1 702 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TMEM8AQ9HCN3 771 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ZDHHC7Q9NXF8 308 aa13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TCF20Q9UGU0 1960 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-203ENST00000577442 WDR27A2RRH5 827 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 GRXCR2A6NFK2 248 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms