RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 USP28Q96RU2 1077 aa16.17■□□□□ 0.18
MKS1-205ENST00000577315 DDX23Q9BUQ8 820 aaKnown RBP16.17■□□□□ 0.18
MKS1-205ENST00000577315 CEP72Q9P209 647 aa16.17■□□□□ 0.18
MKS1-205ENST00000577315 YIPF1Q9Y548 306 aa16.17■□□□□ 0.18
MKS1-205ENST00000577315 PATJQ8NI35 1801 aa16.17■□□□□ 0.18
MKS1-205ENST00000577315 PRR23AA6NEV1 266 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 NCAM2O15394 837 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 IDEP14735 1019 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 GARTP22102 1010 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 NASPP49321 788 aaPredicted RBP16.16■□□□□ 0.18
MKS1-205ENST00000577315 TAF6P49848 677 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 GUCY2FP51841 1108 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 SMARCB1Q12824 385 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 STK38Q15208 465 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 THEM5Q8N1Q8 247 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 DEPDC1BQ8WUY9 529 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 BORCS6Q96GS4 357 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 ZNF396Q96N95 335 aaPredicted RBP16.16■□□□□ 0.18
MKS1-205ENST00000577315 ASB16Q96NS5 453 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 BCO2Q9BYV7 579 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 DPP3Q9NY33 737 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 DLGAP2Q9P1A6 1054 aa16.16■□□□□ 0.18
MKS1-205ENST00000577315 MRPS17Q9Y2R5 130 aaKnown RBP16.16■□□□□ 0.18
MKS1-205ENST00000577315 TICRRQ7Z2Z1 1910 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 ZFHX2Q9C0A1 2572 aaPredicted RBP16.15■□□□□ 0.18
MKS1-205ENST00000577315 FRMD3A2A2Y4 597 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 MTMR11A4FU01 709 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 PPEF2O14830 753 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 PPP6R2O75170 966 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 GCNT3O95395 438 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 FGF19O95750 216 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 DCNP07585 359 aaKnown RBP16.15■□□□□ 0.18
MKS1-205ENST00000577315 MYL4P12829 197 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 PNPLA4P41247 253 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 DUSP4Q13115 394 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 TANGO2Q6ICL3 276 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 CENPPQ6IPU0 288 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 ZC3H14Q6PJT7 736 aaKnown RBP16.15■□□□□ 0.18
MKS1-205ENST00000577315 STXBP4Q6ZWJ1 553 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 ITIH5Q86UX2 942 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 C1orf210Q8IVY1 113 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 CCDC65Q8IXS2 484 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 SYCP3Q8IZU3 236 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 C2orf15Q8WU43 125 aaKnown RBP16.15■□□□□ 0.18
MKS1-205ENST00000577315 CACTINQ8WUQ7 758 aaKnown RBP16.15■□□□□ 0.18
MKS1-205ENST00000577315 SMARCD2Q92925 531 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 IRF7Q92985 503 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 TCEAL4Q96EI5 215 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 ZNF560Q96MR9 790 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 PGLYRP2Q96PD5 576 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 TRMT61BQ9BVS5 477 aaKnown RBP16.15■□□□□ 0.18
MKS1-205ENST00000577315 FOXQ1Q9C009 403 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 CUEDC2Q9H467 287 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 TMEM206Q9H813 350 aa16.15■□□□□ 0.18
MKS1-205ENST00000577315 MAN2B1O00754 1011 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 CYB561D2O14569 222 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 KIAA0391O15091 583 aaKnown RBP16.14■□□□□ 0.17
MKS1-205ENST00000577315 SPTLC2O15270 562 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 OR4Q2P0C623 313 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 PSMC3P17980 439 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 ADSSP30520 456 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 CCR2P41597 374 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 TUFMP49411 452 aaKnown RBP16.14■□□□□ 0.17
MKS1-205ENST00000577315 SV2CQ496J9 727 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 FAM78AQ5JUQ0 283 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 CRELD2Q6UXH1 353 aaPredicted RBP16.14■□□□□ 0.17
MKS1-205ENST00000577315 FRMD5Q7Z6J6 570 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 HS6ST3Q8IZP7 471 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 TMEM130Q8N3G9 435 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 LINC00301Q8NCQ3 95 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 SNX21Q969T3 373 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 PLA2G2FQ9BZM2 168 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 TNMDQ9H2S6 317 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 BRD9Q9H8M2 597 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 TRPV4Q9HBA0 871 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 LTB4R2Q9NPC1 389 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 TRPV5Q9NQA5 729 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 PANK4Q9NVE7 773 aa16.14■□□□□ 0.17
MKS1-205ENST00000577315 FAM170BA6NMN3 283 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 TISP43B9A030 160 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 SPTLC1O15269 473 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 MOSPD3O75425 235 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 VNN2O95498 520 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 YEATS4O95619 227 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 FCARP24071 287 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 AMPD3Q01432 767 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 UBXN2BQ14CS0 331 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 VEPH1Q14D04 833 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 ZNF852Q6ZMS4 543 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 TPRG1Q6ZUI0 275 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 ASCL5Q7RTU5 278 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 BRSK2Q8IWQ3 736 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 SPPL2BQ8TCT7 592 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 PSMG2Q969U7 264 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 PYM1Q9BRP8 204 aaKnown RBP16.13■□□□□ 0.17
MKS1-205ENST00000577315 PANK2Q9BZ23 570 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 SLITRK6Q9H5Y7 841 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 TBC1D7Q9P0N9 293 aa16.13■□□□□ 0.17
MKS1-205ENST00000577315 USP34Q70CQ2 3546 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms