RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 WDR27A2RRH5 827 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 ZMYND10O75800 440 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 KIF20AO95235 890 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 TNNC2P02585 160 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 CPB1P15086 417 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 CYP24A1Q07973 514 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 SV2CQ496J9 727 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 PPM1LQ5SGD2 360 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 OVOS1Q6IE37 1185 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 CCDC149Q6ZUS6 474 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 SMYD4Q8IYR2 804 aaPredicted RBP14.3□□□□□ -0.12
RPAIN-216ENST00000575599 CSGALNACT2Q8N6G5 542 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 OR5B17Q8NGF7 314 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 KHSRPQ92945 711 aaKnown RBP eCLIP14.3□□□□□ -0.12
RPAIN-216ENST00000575599 ZNF707Q96C28 371 aaPredicted RBP14.3□□□□□ -0.12
RPAIN-216ENST00000575599 FNBP1Q96RU3 617 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 ANP32EQ9BTT0 268 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 KCTD10Q9H3F6 313 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 INTS13Q9NVM9 706 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 ZDHHC7Q9NXF8 308 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 HOOK1Q9UJC3 728 aaKnown RBP14.3□□□□□ -0.12
RPAIN-216ENST00000575599 ITGA11Q9UKX5 1188 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 NR2E1Q9Y466 385 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 DENND4AQ7Z401 1863 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 ARHGEF37A1IGU5 675 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 LOC730098B7Z3J9 87 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 CYB561D2O14569 222 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 CCL16O15467 120 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 TBC1D4O60343 1298 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 NR3C1P04150 777 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 OR4Q2P0C623 313 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 TNNI1P19237 187 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 TYMPP19971 482 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 PAX3P23760 479 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 PNPLA4P41247 253 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 BFSP1Q12934 665 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 PSMD6Q15008 389 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 SCARA3Q6AZY7 606 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 CAVIN1Q6NZI2 390 aaKnown RBP14.29□□□□□ -0.12
RPAIN-216ENST00000575599 WDR49Q8IV35 697 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 SMARCE1Q969G3 411 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 TIGD1Q96MW7 591 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 CGRRF1Q99675 332 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 PRKD2Q9BZL6 878 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 RMND1Q9NWS8 449 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 POLIQ9UNA4 740 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 R3HCC1Q9Y3T6 440 aaKnown RBP14.29□□□□□ -0.12
RPAIN-216ENST00000575599 CUL9Q8IWT3 2517 aa14.29□□□□□ -0.12
RPAIN-216ENST00000575599 KPNA7A9QM74 516 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 C2CD4DB7Z1M9 353 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 PDXKO00764 312 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 PRRG1O14668 218 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 CALUO43852 315 aaPredicted RBP14.28□□□□□ -0.12
RPAIN-216ENST00000575599 OAZ2O95190 189 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 SMC2O95347 1197 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 ELF1P32519 619 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 RBP5P82980 135 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 DUOXA2Q1HG44 320 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 CEP135Q66GS9 1140 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 METTL23Q86XA0 190 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 RNF135Q8IUD6 432 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 TDRD5Q8NAT2 981 aaKnown RBP14.28□□□□□ -0.12
RPAIN-216ENST00000575599 ZNF461Q8TAF7 563 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 PGLYRP2Q96PD5 576 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 CYP4F11Q9HBI6 524 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 MUTYHQ9UIF7 546 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 SIX4Q9UIU6 781 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 DSEQ9UL01 958 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 CLUHO75153 1309 aa14.28□□□□□ -0.12
RPAIN-216ENST00000575599 OR6C75A6NL08 312 aa14.27□□□□□ -0.12
RPAIN-216ENST00000575599 ABLIM3O94929 683 aa14.27□□□□□ -0.12
RPAIN-216ENST00000575599 HNRNPA1P09651 372 aaKnown RBP eCLIP14.27□□□□□ -0.12
RPAIN-216ENST00000575599 CASP4P49662 377 aa14.27□□□□□ -0.12
RPAIN-216ENST00000575599 ADCY1Q08828 1119 aa14.27□□□□□ -0.12
RPAIN-216ENST00000575599 CCDC183Q5T5S1 534 aa14.27□□□□□ -0.12
RPAIN-216ENST00000575599 WSCD1Q658N2 575 aa14.27□□□□□ -0.12
RPAIN-216ENST00000575599 CYP26C1Q6V0L0 522 aa14.27□□□□□ -0.12
RPAIN-216ENST00000575599 RNF19BQ6ZMZ0 732 aa14.27□□□□□ -0.12
RPAIN-216ENST00000575599 GUF1Q8N442 669 aaKnown RBP14.27□□□□□ -0.12
RPAIN-216ENST00000575599 LRRC52Q8N7C0 313 aa14.27□□□□□ -0.12
RPAIN-216ENST00000575599 CXorf38Q8TB03 319 aa14.27□□□□□ -0.12
RPAIN-216ENST00000575599 MFSD14AQ96MC6 490 aa14.27□□□□□ -0.12
RPAIN-216ENST00000575599 OXCT2Q9BYC2 517 aaPredicted RBP14.27□□□□□ -0.12
RPAIN-216ENST00000575599 NUP62CLQ9H1M0 184 aa14.27□□□□□ -0.12
RPAIN-216ENST00000575599 WDR6Q9NNW5 1121 aaKnown RBP14.27□□□□□ -0.12
RPAIN-216ENST00000575599 PCDHA5Q9Y5H7 936 aa14.27□□□□□ -0.12
RPAIN-216ENST00000575599 NCOR1O75376 2440 aa14.27□□□□□ -0.13
RPAIN-216ENST00000575599 XYLBO75191 536 aa14.26□□□□□ -0.13
RPAIN-216ENST00000575599 CLSTN1O94985 981 aa14.26□□□□□ -0.13
RPAIN-216ENST00000575599 LETM1O95202 739 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-216ENST00000575599 SEC24AO95486 1093 aa14.26□□□□□ -0.13
RPAIN-216ENST00000575599 LRG1P02750 347 aa14.26□□□□□ -0.13
RPAIN-216ENST00000575599 CYP11A1P05108 521 aa14.26□□□□□ -0.13
RPAIN-216ENST00000575599 ATF2P15336 505 aa14.26□□□□□ -0.13
RPAIN-216ENST00000575599 NR2F2P24468 414 aa14.26□□□□□ -0.13
RPAIN-216ENST00000575599 HOXA9P31269 272 aa14.26□□□□□ -0.13
RPAIN-216ENST00000575599 PLCB2Q00722 1185 aa14.26□□□□□ -0.13
RPAIN-216ENST00000575599 MYO1EQ12965 1108 aa14.26□□□□□ -0.13
RPAIN-216ENST00000575599 UVSSAQ2YD98 709 aa14.26□□□□□ -0.13
RPAIN-216ENST00000575599 TPGS2Q68CL5 300 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms