RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 GPR17Q13304 367 aa28.16■■■□□ 2.1
NPLOC4-215ENST00000574095 RESP18Q5W5W9 173 aa28.16■■■□□ 2.1
NPLOC4-215ENST00000574095 ARMCX5Q6P1M9 558 aa28.16■■■□□ 2.1
NPLOC4-215ENST00000574095 POTEHQ6S545 545 aa28.16■■■□□ 2.1
NPLOC4-215ENST00000574095 STXBP4Q6ZWJ1 553 aa28.16■■■□□ 2.1
NPLOC4-215ENST00000574095 MTSS1LQ765P7 747 aa28.16■■■□□ 2.1
NPLOC4-215ENST00000574095 TCEAL4Q96EI5 215 aa28.16■■■□□ 2.1
NPLOC4-215ENST00000574095 C7orf25Q9BPX7 421 aa28.16■■■□□ 2.1
NPLOC4-215ENST00000574095 CRISPLD1Q9H336 500 aa28.16■■■□□ 2.1
NPLOC4-215ENST00000574095 RBAKQ9NYW8 714 aaPredicted RBP28.16■■■□□ 2.1
NPLOC4-215ENST00000574095 CEP72Q9P209 647 aa28.16■■■□□ 2.1
NPLOC4-215ENST00000574095 KRBA1A5PL33 1030 aa28.15■■■□□ 2.1
NPLOC4-215ENST00000574095 CYB561D2O14569 222 aa28.15■■■□□ 2.1
NPLOC4-215ENST00000574095 EXTL3O43909 919 aa28.15■■■□□ 2.1
NPLOC4-215ENST00000574095 CEBPBP17676 345 aa28.15■■■□□ 2.1
NPLOC4-215ENST00000574095 HOXD11P31277 338 aaPredicted RBP28.15■■■□□ 2.1
NPLOC4-215ENST00000574095 TFAMQ00059 246 aaKnown RBP28.15■■■□□ 2.1
NPLOC4-215ENST00000574095 DUSP4Q13115 394 aa28.15■■■□□ 2.1
NPLOC4-215ENST00000574095 NT5DC4Q86YG4 428 aa28.15■■■□□ 2.1
NPLOC4-215ENST00000574095 HS6ST3Q8IZP7 471 aa28.15■■■□□ 2.1
NPLOC4-215ENST00000574095 ELMOD1Q8N336 334 aa28.15■■■□□ 2.1
NPLOC4-215ENST00000574095 ZNF512Q96ME7 567 aaPredicted RBP28.15■■■□□ 2.1
NPLOC4-215ENST00000574095 PYM1Q9BRP8 204 aaKnown RBP28.15■■■□□ 2.1
NPLOC4-215ENST00000574095 BLZF1Q9H2G9 400 aa28.15■■■□□ 2.1
NPLOC4-215ENST00000574095 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.14■■■□□ 2.1
NPLOC4-215ENST00000574095 PI15O43692 258 aa28.14■■■□□ 2.1
NPLOC4-215ENST00000574095 CYP11A1P05108 521 aa28.14■■■□□ 2.1
NPLOC4-215ENST00000574095 HOXD13P35453 343 aa28.14■■■□□ 2.1
NPLOC4-215ENST00000574095 MYBPC2Q14324 1141 aa28.14■■■□□ 2.1
NPLOC4-215ENST00000574095 PRSS36Q5K4E3 855 aa28.14■■■□□ 2.1
NPLOC4-215ENST00000574095 IQCEQ6IPM2 695 aa28.14■■■□□ 2.1
NPLOC4-215ENST00000574095 CNNM4Q6P4Q7 775 aa28.14■■■□□ 2.1
NPLOC4-215ENST00000574095 BORCS6Q96GS4 357 aa28.14■■■□□ 2.1
NPLOC4-215ENST00000574095 FAM84AQ96KN4 292 aa28.14■■■□□ 2.1
NPLOC4-215ENST00000574095 KXD1Q9BQD3 176 aa28.14■■■□□ 2.1
NPLOC4-215ENST00000574095 YIPF1Q9Y548 306 aa28.14■■■□□ 2.1
NPLOC4-215ENST00000574095 STK25O00506 426 aa28.13■■■□□ 2.09
NPLOC4-215ENST00000574095 CCR2P41597 374 aa28.13■■■□□ 2.09
NPLOC4-215ENST00000574095 GPC5P78333 572 aa28.13■■■□□ 2.09
NPLOC4-215ENST00000574095 FAM26FQ5R3K3 315 aa28.13■■■□□ 2.09
NPLOC4-215ENST00000574095 PDZD4Q76G19 769 aaPredicted RBP28.13■■■□□ 2.09
NPLOC4-215ENST00000574095 GPD1LQ8N335 351 aa28.13■■■□□ 2.09
NPLOC4-215ENST00000574095 OR10T2Q8NGX3 314 aa28.13■■■□□ 2.09
NPLOC4-215ENST00000574095 MAGEF1Q9HAY2 307 aa28.13■■■□□ 2.09
NPLOC4-215ENST00000574095 SLC2A4RGQ9NR83 387 aa28.13■■■□□ 2.09
NPLOC4-215ENST00000574095 SLC27A5Q9Y2P5 690 aa28.13■■■□□ 2.09
NPLOC4-215ENST00000574095 KPNA7A9QM74 516 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 NRG2O14511 850 aaPredicted RBP28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 AFMP43652 599 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 CYP4A22Q5TCH4 519 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 SCARA3Q6AZY7 606 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 CENPPQ6IPU0 288 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 EPM2AIP1Q7L775 607 aaPredicted RBP28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 ALYREFQ86V81 257 aaKnown RBP28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 METTL23Q86XA0 190 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 ATAD1Q8NBU5 361 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 ZNF507Q8TCN5 953 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 CACTINQ8WUQ7 758 aaKnown RBP28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 CHAMP1Q96JM3 812 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 PDE11AQ9HCR9 933 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 GDE1Q9NZC3 331 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 DSEQ9UL01 958 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 AGAP1Q9UPQ3 857 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 ZDHHC9Q9Y397 364 aa28.12■■■□□ 2.09
NPLOC4-215ENST00000574095 MTMR11A4FU01 709 aa28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 ZNF197O14709 1029 aa28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 GALR2O43603 387 aaPredicted RBP28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 ITGB3P05106 788 aa28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 MYL4P12829 197 aa28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 AOC1P19801 751 aa28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 POLR2BP30876 1174 aaKnown RBP28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 CDR1P51861 262 aa28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 NUBP1P53384 320 aa28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 SV2CQ496J9 727 aa28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 WSCD1Q658N2 575 aa28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 UNC13DQ70J99 1090 aa28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 C1orf127Q8N9H9 656 aa28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 PHOX2BQ99453 314 aa28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 RTP3Q9BQQ7 232 aa28.11■■■□□ 2.09
NPLOC4-215ENST00000574095 H0Y858 1186 aa28.1■■■□□ 2.09
NPLOC4-215ENST00000574095 EIF3DO15371 548 aaKnown RBP eCLIP28.1■■■□□ 2.09
NPLOC4-215ENST00000574095 GJA1P17302 382 aa28.1■■■□□ 2.09
NPLOC4-215ENST00000574095 CUL4BQ13620 913 aa28.1■■■□□ 2.09
NPLOC4-215ENST00000574095 GRAMD1CQ8IYS0 662 aa28.1■■■□□ 2.09
NPLOC4-215ENST00000574095 THEM5Q8N1Q8 247 aa28.1■■■□□ 2.09
NPLOC4-215ENST00000574095 ZNF560Q96MR9 790 aa28.1■■■□□ 2.09
NPLOC4-215ENST00000574095 PLA2G2FQ9BZM2 168 aa28.1■■■□□ 2.09
NPLOC4-215ENST00000574095 SERTAD1Q9UHV2 236 aa28.1■■■□□ 2.09
NPLOC4-215ENST00000574095 KIAA0391O15091 583 aaKnown RBP28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 MOSPD3O75425 235 aa28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 RFX1P22670 979 aa28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 EHHADHQ08426 723 aa28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 SLC39A12Q504Y0 691 aa28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 LMBRD2Q68DH5 695 aaPredicted RBP28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 TANGO2Q6ICL3 276 aa28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 CBWD2Q8IUF1 395 aa28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 CSGALNACT2Q8N6G5 542 aa28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 TTC9BQ8N6N2 239 aa28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 ZCWPW1Q9H0M4 648 aa28.09■■■□□ 2.09
NPLOC4-215ENST00000574095 DNAJC25Q9H1X3 360 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms