RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 LACTBP83111 547 aaPredicted RBP20.18■□□□□ 0.82
SCARF1-206ENST00000573852 ENPEPQ07075 957 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 CAPN12Q6ZSI9 719 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 FBF1Q8TES7 1133 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 FNBP1Q96RU3 617 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 PDLIM7Q9NR12 457 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 ZNF148Q9UQR1 794 aa20.18■□□□□ 0.82
SCARF1-206ENST00000573852 CUL2Q13617 745 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 PSMD6Q15008 389 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 PHF13Q86YI8 300 aaPredicted RBP20.17■□□□□ 0.82
SCARF1-206ENST00000573852 C4orf33Q8N1A6 199 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 ERP27Q96DN0 273 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 GMLQ99445 158 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 PRPF4O43172 522 aaKnown RBP eCLIP20.17■□□□□ 0.82
SCARF1-206ENST00000573852 ARSEP51690 589 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 MOGSQ13724 837 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 ARHGEF16Q5VV41 709 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 MFSD7Q6UXD7 560 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 KRT27Q7Z3Y8 459 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 TDRPQ86YL5 185 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 LARGE2Q8N3Y3 721 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 FEZF2Q8TBJ5 459 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 VCPIP1Q96JH7 1222 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 ADAM33Q9BZ11 813 aa20.17■□□□□ 0.82
SCARF1-206ENST00000573852 SCAF8Q9UPN6 1271 aaKnown RBP20.17■□□□□ 0.82
SCARF1-206ENST00000573852 ATF7P17544 494 aaPredicted RBP20.16■□□□□ 0.82
SCARF1-206ENST00000573852 RPA3P35244 121 aaPredicted RBP20.16■□□□□ 0.82
SCARF1-206ENST00000573852 ATP11AP98196 1134 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 LMNB2Q03252 620 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 NR1H3Q13133 447 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 CCDC142Q17RM4 750 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 TRIM72Q6ZMU5 477 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 MRRFQ96E11 262 aaKnown RBP20.16■□□□□ 0.82
SCARF1-206ENST00000573852 SLITRK1Q96PX8 696 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 UBN1Q9NPG3 1134 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 TXLNGQ9NUQ3 528 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 ARHGAP28Q9P2N2 729 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 CEP83Q9Y592 693 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 ZNF541Q9H0D2 1346 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 WDR46O15213 610 aaKnown RBP20.16■□□□□ 0.82
SCARF1-206ENST00000573852 LIG4P49917 911 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 YARSP54577 528 aaKnown RBP20.16■□□□□ 0.82
SCARF1-206ENST00000573852 GPS1Q13098 491 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 SPARCL1Q14515 664 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 NLRX1Q86UT6 975 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 VSIG1Q86XK7 387 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 CNKSR1Q969H4 720 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 TMEM237Q96Q45 408 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 HAPLN2Q9GZV7 340 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 SCINQ9Y6U3 715 aa20.16■□□□□ 0.82
SCARF1-206ENST00000573852 ARID2Q68CP9 1835 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 KRT15P19012 456 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 TARSP26639 723 aaKnown RBP20.15■□□□□ 0.82
SCARF1-206ENST00000573852 SLC1A5Q15758 541 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 EAPPQ56P03 285 aaPredicted RBP20.15■□□□□ 0.82
SCARF1-206ENST00000573852 ZFYVE27Q5T4F4 411 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 SCARA3Q6AZY7 606 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 SWSAP1Q6NVH7 229 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 CEP128Q6ZU80 1094 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 RCOR2Q8IZ40 523 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 ALLCQ8N6M5 410 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 SENP7Q9BQF6 1050 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 VPS37BQ9H9H4 285 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 MAP3K20Q9NYL2 800 aaKnown RBP20.15■□□□□ 0.82
SCARF1-206ENST00000573852 PGAP2Q9UHJ9 254 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 USH1CQ9Y6N9 552 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 NFASCO94856 1347 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 EP400NLQ6ZTU2 488 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 RBBP8NLQ8NC74 664 aaPredicted RBP20.15■□□□□ 0.82
SCARF1-206ENST00000573852 RDM1Q8NG50 284 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 TTC25Q96NG3 672 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 POLR3FQ9H1D9 316 aaPredicted RBP20.15■□□□□ 0.82
SCARF1-206ENST00000573852 PARVAQ9NVD7 372 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 SLC5A4Q9NY91 659 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 HAO1Q9UJM8 370 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 IVNS1ABPQ9Y6Y0 642 aa20.15■□□□□ 0.82
SCARF1-206ENST00000573852 A0A1W2PPM1 405 aa20.14■□□□□ 0.82
SCARF1-206ENST00000573852 DGAT1O75907 488 aa20.14■□□□□ 0.82
SCARF1-206ENST00000573852 KRT1P04264 644 aa20.14■□□□□ 0.82
SCARF1-206ENST00000573852 SP4Q02446 784 aa20.14■□□□□ 0.82
SCARF1-206ENST00000573852 C1QBPQ07021 282 aaKnown RBP20.14■□□□□ 0.82
SCARF1-206ENST00000573852 ZNF252P-AS1Q0IIN9 211 aa20.14■□□□□ 0.82
SCARF1-206ENST00000573852 SETDB1Q15047 1291 aa20.14■□□□□ 0.82
SCARF1-206ENST00000573852 PDK4Q16654 411 aa20.14■□□□□ 0.82
SCARF1-206ENST00000573852 RGS9BPQ6ZS82 235 aa20.14■□□□□ 0.82
SCARF1-206ENST00000573852 BZW1Q7L1Q6 419 aaKnown RBP20.14■□□□□ 0.82
SCARF1-206ENST00000573852 HAUS1Q96CS2 278 aa20.14■□□□□ 0.82
SCARF1-206ENST00000573852 ZBTB45Q96K62 511 aaPredicted RBP20.14■□□□□ 0.82
SCARF1-206ENST00000573852 LRRC37BQ96QE4 947 aa20.14■□□□□ 0.82
SCARF1-206ENST00000573852 RAB3IPQ96QF0 476 aaPredicted RBP20.14■□□□□ 0.82
SCARF1-206ENST00000573852 LRMDAQ9H2I8 198 aa20.14■□□□□ 0.82
SCARF1-206ENST00000573852 SEPT9Q9UHD8 586 aaPredicted RBP20.14■□□□□ 0.82
SCARF1-206ENST00000573852 EDF1O60869 148 aaKnown RBP20.14■□□□□ 0.81
SCARF1-206ENST00000573852 ATP2A2P16615 1042 aaKnown RBP20.14■□□□□ 0.81
SCARF1-206ENST00000573852 CETN2P41208 172 aa20.14■□□□□ 0.81
SCARF1-206ENST00000573852 ZBTB41Q5SVQ8 909 aa20.14■□□□□ 0.81
SCARF1-206ENST00000573852 TXNRD3NBQ6F5E7 133 aa20.14■□□□□ 0.81
SCARF1-206ENST00000573852 ZBED8Q8IZ13 594 aa20.14■□□□□ 0.81
SCARF1-206ENST00000573852 MCPH1Q8NEM0 835 aa20.14■□□□□ 0.81
SCARF1-206ENST00000573852 ACSF2Q96CM8 615 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms