RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 PIK3CAP42336 1068 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 VAV2P52735 878 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 GNG11P61952 73 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 CLDN10P78369 228 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 ADAM15Q13444 863 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 FAM187BQ17R55 369 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 KIZQ2M2Z5 673 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 ARHGAP29Q52LW3 1261 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 SRGAP1Q7Z6B7 1085 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 TMCO2Q7Z6W1 182 aaPredicted RBP10.3□□□□□ -0.76
NDE1-208ENST00000573694 TMEM130Q8N3G9 435 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 EFHBQ8N7U6 833 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 FBXL13Q8NEE6 735 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 OR5B17Q8NGF7 314 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 SPPL3Q8TCT6 385 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 KREMEN1Q96MU8 473 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 FNBP1Q96RU3 617 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 TCHPQ9BT92 498 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 STK33Q9BYT3 514 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 CDHR5Q9HBB8 845 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 UBE2TQ9NPD8 197 aaPredicted RBP10.3□□□□□ -0.76
NDE1-208ENST00000573694 UBN1Q9NPG3 1134 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 KANSL3Q9P2N6 904 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 CPSF3Q9UKF6 684 aaKnown RBP10.3□□□□□ -0.76
NDE1-208ENST00000573694 GUCA1BQ9UMX6 200 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 TNFSF13BQ9Y275 285 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 COQ4Q9Y3A0 265 aa10.3□□□□□ -0.76
NDE1-208ENST00000573694 A0A087X0T9 212 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 MEFVO15553 781 aaPredicted RBP10.29□□□□□ -0.76
NDE1-208ENST00000573694 IPO7O95373 1038 aaKnown RBP10.29□□□□□ -0.76
NDE1-208ENST00000573694 C4BPAP04003 597 aaKnown RBP10.29□□□□□ -0.76
NDE1-208ENST00000573694 FAM228BP0C875 321 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 FERP16591 822 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 HOXB8P17481 243 aaPredicted RBP10.29□□□□□ -0.76
NDE1-208ENST00000573694 ATF7P17544 494 aaPredicted RBP10.29□□□□□ -0.76
NDE1-208ENST00000573694 ARF4P18085 180 aaPredicted RBP10.29□□□□□ -0.76
NDE1-208ENST00000573694 TNNI1P19237 187 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 RFX1P22670 979 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 AXLP30530 894 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 PRKCIP41743 596 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 OSTNP61366 133 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 KRT83P78385 493 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 TFF2Q03403 129 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 PTK2Q05397 1052 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 NCBP1Q09161 790 aaKnown RBP10.29□□□□□ -0.76
NDE1-208ENST00000573694 CETN1Q12798 172 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 SPA17Q15506 151 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 SMAD2Q15796 467 aaKnown RBP10.29□□□□□ -0.76
NDE1-208ENST00000573694 ZACNQ401N2 412 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 TCEAL5Q5H9L2 206 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 PTCRAQ6ISU1 281 aaPredicted RBP10.29□□□□□ -0.76
NDE1-208ENST00000573694 USP37Q86T82 979 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 FAM228AQ86W67 206 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 DNAAF5Q86Y56 855 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 ADHFE1Q8IWW8 467 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 EFCAB13Q8IY85 973 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 THNSL1Q8IYQ7 743 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 ABI1Q8IZP0 508 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 LRRC43Q8N309 656 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 SLC35F6Q8N357 371 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 KIF18AQ8NI77 898 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 LNX1Q8TBB1 728 aaPredicted RBP10.29□□□□□ -0.76
NDE1-208ENST00000573694 HELQQ8TDG4 1101 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 LINC01599Q8WXQ3 324 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 TATDN2Q93075 761 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 PGBD4Q96DM1 585 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 FAM212AQ96EL1 285 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 NT5C1BQ96P26 610 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 OSMRQ99650 979 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 PACSIN1Q9BY11 444 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 OSBPL7Q9BZF2 842 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 MTMR12Q9C0I1 747 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 RAB20Q9NX57 234 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 MTUS1Q9ULD2 1270 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 NENFQ9UMX5 172 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 GINS2Q9Y248 185 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 DAAM1Q9Y4D1 1078 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 PCDHA13Q9Y5I0 950 aa10.29□□□□□ -0.76
NDE1-208ENST00000573694 FAM170AA1A519 330 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 C19orf67A6NJJ6 358 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 FOXN3O00409 490 aaPredicted RBP10.28□□□□□ -0.76
NDE1-208ENST00000573694 KIF5CO60282 957 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 CXCL8P10145 99 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 KCNA5P22460 613 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 MAGEA1P43355 309 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 KCNQ1P51787 676 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 SMAD4Q13485 552 aaKnown RBP10.28□□□□□ -0.76
NDE1-208ENST00000573694 BIRC3Q13489 604 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 SLC18A3Q16572 532 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 ZNF569Q5MCW4 686 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 CCDC122Q5T0U0 273 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 SPOPLQ6IQ16 392 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 ECHDC2Q86YB7 292 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 GPR65Q8IYL9 337 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 GJD3Q8N144 294 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 PPM1KQ8N3J5 372 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.28□□□□□ -0.76
NDE1-208ENST00000573694 SLC20A1Q8WUM9 679 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 TMEM40Q8WWA1 233 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 PRIMPOLQ96LW4 560 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms