RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SHKBP1Q8TBC3 707 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 ELSPBP1Q96BH3 223 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 ZNF512Q96ME7 567 aaPredicted RBP19.63■□□□□ 0.73
CHD3-214ENST00000572579 ASB7Q9H672 318 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 CCDC39Q9UFE4 941 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 DERAQ9Y315 318 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 MTMR11A4FU01 709 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 OR6C75A6NL08 312 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 STX6O43752 255 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 CYP11A1P05108 521 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 MYL4P12829 197 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 NASPP49321 788 aaPredicted RBP19.62■□□□□ 0.73
CHD3-214ENST00000572579 TEAD2Q15562 447 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 SLFN12LQ6IEE8 588 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 USP37Q86T82 979 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 LINC00301Q8NCQ3 95 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 GLIS3Q8NEA6 775 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 CXorf38Q8TB03 319 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 MKNK1Q9BUB5 465 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 MRPL44Q9H9J2 332 aaKnown RBP19.62■□□□□ 0.73
CHD3-214ENST00000572579 ZNF334Q9HCZ1 680 aaPredicted RBP19.62■□□□□ 0.73
CHD3-214ENST00000572579 HEBP1Q9NRV9 189 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 C2CD2Q9Y426 696 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 PDCD11Q14690 1871 aaKnown RBP19.62■□□□□ 0.73
CHD3-214ENST00000572579 FAM186AA6NE01 2351 aa19.62■□□□□ 0.73
CHD3-214ENST00000572579 FAM170BA6NMN3 283 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 K7ELQ4 463 aaPredicted RBP19.61■□□□□ 0.73
CHD3-214ENST00000572579 ZNF197O14709 1029 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 XPOTO43592 962 aaKnown RBP19.61■□□□□ 0.73
CHD3-214ENST00000572579 PRKCQQ04759 706 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 MYBPC2Q14324 1141 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 STXBP5Q5T5C0 1151 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 L1TD1Q5T7N2 865 aaKnown RBP19.61■□□□□ 0.73
CHD3-214ENST00000572579 CYP4A22Q5TCH4 519 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 WSCD1Q658N2 575 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 VITQ6UXI7 678 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 GAREM2Q75VX8 874 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 GPIHBP1Q8IV16 184 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 C1orf210Q8IVY1 113 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 POMGNT1Q8WZA1 660 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 HPS3Q969F9 1004 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 SAAL1Q96ER3 474 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 LRRC3BQ96PB8 259 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 DPP3Q9NY33 737 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 TFIP11Q9UBB9 837 aaKnown RBP19.61■□□□□ 0.73
CHD3-214ENST00000572579 SEL1LQ9UBV2 794 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.61■□□□□ 0.73
CHD3-214ENST00000572579 R4GN57 208 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 CACNA1IQ9P0X4 2223 aa19.61■□□□□ 0.73
CHD3-214ENST00000572579 GVINP1Q7Z2Y8 2422 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 GPR179Q6PRD1 2367 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 SP9P0CG40 484 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 RFX1P22670 979 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 TARSP26639 723 aaKnown RBP19.6■□□□□ 0.73
CHD3-214ENST00000572579 HOXD13P35453 343 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 POU5F1Q01860 360 aaKnown RBP19.6■□□□□ 0.73
CHD3-214ENST00000572579 E2F4Q16254 413 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 IQCEQ6IPM2 695 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 PDILTQ8N807 584 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 SMARCD2Q92925 531 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 NKD2Q969F2 451 aaPredicted RBP19.6■□□□□ 0.73
CHD3-214ENST00000572579 HVCN1Q96D96 273 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 SHDQ96IW2 340 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 FAM213AQ9BRX8 229 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 OXCT2Q9BYC2 517 aaPredicted RBP19.6■□□□□ 0.73
CHD3-214ENST00000572579 ZCWPW1Q9H0M4 648 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 TRPV4Q9HBA0 871 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 ZFP14Q9HCL3 533 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 LTB4R2Q9NPC1 389 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 FRYLO94915 3013 aa19.6■□□□□ 0.73
CHD3-214ENST00000572579 DCHS1Q96JQ0 3298 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 MYH15Q9Y2K3 1946 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 EP300Q09472 2414 aaPredicted RBP19.59■□□□□ 0.73
CHD3-214ENST00000572579 A0A1W2PRU2 124 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 ARNTLO00327 626 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 CYB561D2O14569 222 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 GAP43P17677 238 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 ABCD1P33897 745 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 PFKPQ01813 784 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 UBXN2BQ14CS0 331 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 CCDC73Q6ZRK6 1079 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 TPRG1Q6ZUI0 275 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 DNAJB7Q7Z6W7 309 aaPredicted RBP19.59■□□□□ 0.73
CHD3-214ENST00000572579 ZSCAN18Q8TBC5 510 aaPredicted RBP19.59■□□□□ 0.73
CHD3-214ENST00000572579 CLDN23Q96B33 292 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 ACCSQ96QU6 501 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 CBWD1Q9BRT8 395 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 ZSCAN16Q9H4T2 348 aaPredicted RBP19.59■□□□□ 0.73
CHD3-214ENST00000572579 ASAH2Q9NR71 780 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 OLFML3Q9NRN5 406 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 F5P12259 2224 aa19.59■□□□□ 0.73
CHD3-214ENST00000572579 GOLGA8IPA6NC78 632 aa19.58■□□□□ 0.72
CHD3-214ENST00000572579 GOLGA8JA6NMD2 632 aa19.58■□□□□ 0.72
CHD3-214ENST00000572579 PRPF6O94906 941 aaKnown RBP19.58■□□□□ 0.72
CHD3-214ENST00000572579 GCNT3O95395 438 aa19.58■□□□□ 0.72
CHD3-214ENST00000572579 ODC1P11926 461 aa19.58■□□□□ 0.72
CHD3-214ENST00000572579 IDEP14735 1019 aa19.58■□□□□ 0.72
CHD3-214ENST00000572579 STAT6P42226 847 aa19.58■□□□□ 0.72
CHD3-214ENST00000572579 POSTNQ15063 836 aa19.58■□□□□ 0.72
CHD3-214ENST00000572579 LPIN3Q9BQK8 851 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms