RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 DNA2P51530 1060 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 TFAMQ00059 246 aaKnown RBP18.49■□□□□ 0.55
RPAIN-208ENST00000571043 LONRF2Q1L5Z9 754 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 BEND6Q5SZJ8 279 aaPredicted RBP18.49■□□□□ 0.55
RPAIN-208ENST00000571043 EFCAB13Q8IY85 973 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 RASGEF1CQ8N431 466 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 CEP120Q8N960 986 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 USP38Q8NB14 1042 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 RBBP8NLQ8NC74 664 aaPredicted RBP18.49■□□□□ 0.55
RPAIN-208ENST00000571043 TRIM11Q96F44 468 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 RPS6KC1Q96S38 1066 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 NIF3L1Q9GZT8 377 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 ASB7Q9H672 318 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 SMARCAL1Q9NZC9 954 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 EHD2Q9NZN4 543 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 TRPV2Q9Y5S1 764 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 CDY2AQ9Y6F7 541 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 MYBL1P10243 752 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 DARSP14868 501 aaKnown RBP18.49■□□□□ 0.55
RPAIN-208ENST00000571043 ARF4P18085 180 aaPredicted RBP18.49■□□□□ 0.55
RPAIN-208ENST00000571043 ZNF132P52740 706 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 MYL6P60660 151 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 BFSP2Q13515 415 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 ZNF618Q5T7W0 954 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 TMEM270Q6UE05 265 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 ZNF653Q96CK0 615 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 OSMRQ99650 979 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 AVENQ9NQS1 362 aaPredicted RBP18.49■□□□□ 0.55
RPAIN-208ENST00000571043 RBM12Q9NTZ6 932 aaKnown RBP18.49■□□□□ 0.55
RPAIN-208ENST00000571043 TMEM59LQ9UK28 342 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 TTC7AQ9ULT0 858 aaPredicted RBP18.49■□□□□ 0.55
RPAIN-208ENST00000571043 GINS2Q9Y248 185 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 ATP11BQ9Y2G3 1177 aa18.49■□□□□ 0.55
RPAIN-208ENST00000571043 UMODL1Q5DID0 1318 aa18.48■□□□□ 0.55
RPAIN-208ENST00000571043 MIF4GDA9UHW6 222 aaKnown RBP18.48■□□□□ 0.55
RPAIN-208ENST00000571043 PITPNM1O00562 1244 aa18.48■□□□□ 0.55
RPAIN-208ENST00000571043 DDX3YO15523 660 aaKnown RBP18.48■□□□□ 0.55
RPAIN-208ENST00000571043 CEP104O60308 925 aa18.48■□□□□ 0.55
RPAIN-208ENST00000571043 TSPAN1O60635 241 aa18.48■□□□□ 0.55
RPAIN-208ENST00000571043 CXCL8P10145 99 aa18.48■□□□□ 0.55
RPAIN-208ENST00000571043 OSTNP61366 133 aa18.48■□□□□ 0.55
RPAIN-208ENST00000571043 PCBP1Q15365 356 aaKnown RBP eCLIP18.48■□□□□ 0.55
RPAIN-208ENST00000571043 MAP9Q49MG5 647 aa18.48■□□□□ 0.55
RPAIN-208ENST00000571043 TRAF7Q6Q0C0 670 aa18.48■□□□□ 0.55
RPAIN-208ENST00000571043 CDR2LQ86X02 465 aaPredicted RBP18.48■□□□□ 0.55
RPAIN-208ENST00000571043 TMEM40Q8WWA1 233 aa18.48■□□□□ 0.55
RPAIN-208ENST00000571043 SCLT1Q96NL6 688 aa18.48■□□□□ 0.55
RPAIN-208ENST00000571043 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.48■□□□□ 0.553e-12■■□□□ 13.8
RPAIN-208ENST00000571043 ALG6Q9Y672 507 aa18.48■□□□□ 0.55
RPAIN-208ENST00000571043 A0A1B0GUA9 196 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 PGRMC1O00264 195 aaKnown RBP18.47■□□□□ 0.55
RPAIN-208ENST00000571043 CSDE1O75534 798 aaKnown RBP18.47■□□□□ 0.55
RPAIN-208ENST00000571043 ERLIN2O94905 339 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 CTSHP09668 335 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 GNA15P30679 374 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 YWHAEP62258 255 aaKnown RBP18.47■□□□□ 0.55
RPAIN-208ENST00000571043 CENPCQ03188 943 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 CLUL1Q15846 466 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 APBB1IPQ7Z5R6 666 aaPredicted RBP18.47■□□□□ 0.55
RPAIN-208ENST00000571043 MCOLN2Q8IZK6 566 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 ZNF564Q8TBZ8 553 aaPredicted RBP18.47■□□□□ 0.55
RPAIN-208ENST00000571043 ADPGKQ9BRR6 497 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 LRRC1Q9BTT6 524 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 NUP85Q9BW27 656 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 XYLT2Q9H1B5 865 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 CARD9Q9H257 536 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 RNF216Q9NWF9 866 aaPredicted RBP18.47■□□□□ 0.55
RPAIN-208ENST00000571043 TBX21Q9UL17 535 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 SQORQ9Y6N5 450 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 ALPK3Q96L96 1907 aa18.47■□□□□ 0.55
RPAIN-208ENST00000571043 CCDC85CA6NKD9 419 aa18.46■□□□□ 0.55
RPAIN-208ENST00000571043 LACTBL1A8MY62 500 aa18.46■□□□□ 0.55
RPAIN-208ENST00000571043 CLSTN1O94985 981 aa18.46■□□□□ 0.55
RPAIN-208ENST00000571043 CLTBP09497 229 aa18.46■□□□□ 0.55
RPAIN-208ENST00000571043 TNNC1P63316 161 aa18.46■□□□□ 0.55
RPAIN-208ENST00000571043 ZNF699Q32M78 642 aa18.46■□□□□ 0.55
RPAIN-208ENST00000571043 TMEM192Q8IY95 271 aa18.46■□□□□ 0.55
RPAIN-208ENST00000571043 TNS4Q8IZW8 715 aa18.46■□□□□ 0.55
RPAIN-208ENST00000571043 CPB2Q96IY4 423 aa18.46■□□□□ 0.55
RPAIN-208ENST00000571043 VCPIP1Q96JH7 1222 aa18.46■□□□□ 0.55
RPAIN-208ENST00000571043 FUT8Q9BYC5 575 aa18.46■□□□□ 0.55
RPAIN-208ENST00000571043 CNOT8Q9UFF9 292 aaKnown RBP18.46■□□□□ 0.55
RPAIN-208ENST00000571043 L1RE1Q9UN81 338 aa18.46■□□□□ 0.55
RPAIN-208ENST00000571043 TET1Q8NFU7 2136 aa18.46■□□□□ 0.54
RPAIN-208ENST00000571043 SELPP16109 830 aa18.45■□□□□ 0.54
RPAIN-208ENST00000571043 ATICP31939 592 aa18.45■□□□□ 0.54
RPAIN-208ENST00000571043 NSFP46459 744 aaKnown RBP18.45■□□□□ 0.54
RPAIN-208ENST00000571043 DCAF4L1Q3SXM0 396 aa18.45■□□□□ 0.54
RPAIN-208ENST00000571043 FBXO47Q5MNV8 452 aa18.45■□□□□ 0.54
RPAIN-208ENST00000571043 SCARA3Q6AZY7 606 aa18.45■□□□□ 0.54
RPAIN-208ENST00000571043 C8orf74Q6P047 294 aa18.45■□□□□ 0.54
RPAIN-208ENST00000571043 CCNI2Q6ZMN8 369 aaPredicted RBP18.45■□□□□ 0.54
RPAIN-208ENST00000571043 NT5DC4Q86YG4 428 aa18.45■□□□□ 0.54
RPAIN-208ENST00000571043 CD302Q8IX05 232 aa18.45■□□□□ 0.54
RPAIN-208ENST00000571043 KRT222Q8N1A0 295 aa18.45■□□□□ 0.54
RPAIN-208ENST00000571043 TMEM39AQ9NV64 488 aa18.45■□□□□ 0.54
RPAIN-208ENST00000571043 NOC2LQ9Y3T9 749 aaKnown RBP18.45■□□□□ 0.54
RPAIN-208ENST00000571043 CCDC188H7C350 402 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 MAP2K7O14733 419 aa18.44■□□□□ 0.54
RPAIN-208ENST00000571043 CALCAP01258 141 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms