RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 KCND2Q9NZV8 630 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 DAXXQ9UER7 740 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 KCNG1Q9UIX4 513 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 SMG5Q9UPR3 1016 aaKnown RBP9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 SMC3Q9UQE7 1217 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 PATJQ8NI35 1801 aa9.35□□□□□ -0.91
CTDNEP1-203ENST00000570385 ANK1P16157 1881 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 MTMR11A4FU01 709 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 SLC38A8A6NNN8 435 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 H0YCG3 227 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 MAN2B1O00754 1011 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 OGTO15294 1046 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 TRAK2O60296 914 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 FAM189A1O60320 539 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 MICAL2O94851 1124 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 CYP3A5P20815 502 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 RPS9P46781 194 aaKnown RBP9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 ALDH1A3P47895 512 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 AARSP49588 968 aaKnown RBP eCLIP9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 EPHA5P54756 1037 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 LILRA4P59901 499 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 GPR17Q13304 367 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 RSPO4Q2I0M5 234 aaPredicted RBP9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 SPATA1Q5VX52 437 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 C9orf57Q5W0N0 161 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 LARP1BQ659C4 914 aaKnown RBP9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 CENPPQ6IPU0 288 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 DNAJB7Q7Z6W7 309 aaPredicted RBP9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 TMC8Q8IU68 726 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 ARID3BQ8IVW6 561 aaPredicted RBP9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 MFSD6LQ8IWD5 586 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 YAF2Q8IY57 180 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZNF687Q8N1G0 1237 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 ZBTB44Q8NCP5 570 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 BEST2Q8NFU1 509 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 OR10T2Q8NGX3 314 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 FAM200AQ8TCP9 573 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 RAD54LQ92698 747 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 SENP8Q96LD8 212 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 LRRC3BQ96PB8 259 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 SEPT5Q99719 369 aaPredicted RBP9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 LPIN3Q9BQK8 851 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 SMG9Q9H0W8 520 aaKnown RBP9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 ATXN3LQ9H3M9 355 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 PARVGQ9HBI0 331 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 RBM12Q9NTZ6 932 aaKnown RBP9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 ODF2LQ9ULJ1 636 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 PCDHGA2Q9Y5H1 932 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 ATG2BQ96BY7 2078 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 SCN1AP35498 2009 aa9.34□□□□□ -0.91
CTDNEP1-203ENST00000570385 A0A0B4J269 797 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 OR6C75A6NL08 312 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 XPOTO43592 962 aaKnown RBP9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 TBCAO75347 108 aaKnown RBP9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 ODC1P11926 461 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 GABRR2P28476 465 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 HOXC13P31276 330 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 MAGEA9P43362 315 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 KPNA1P52294 538 aaPredicted RBP9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 CYP4F8P98187 520 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 SATB1Q01826 763 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 GAS6Q14393 721 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 TMEM132DQ14C87 1099 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 SF3A1Q15459 793 aaKnown RBP9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 MGAT5BQ3V5L5 792 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 SLC39A12Q504Y0 691 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 GPR158Q5T848 1215 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 HEATR6Q6AI08 1181 aaKnown RBP9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 ADALQ6DHV7 355 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 ARMCX5Q6P1M9 558 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 USP49Q70CQ1 688 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 GAREM2Q75VX8 874 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 DYMQ7RTS9 669 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 LEMD2Q8NC56 503 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 CSGALNACT1Q8TDX6 532 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 GIPC2Q8TF65 315 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 DEPDC1BQ8WUY9 529 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 EPSTI1Q96J88 318 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 FAM84AQ96KN4 292 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 AK8Q96MA6 479 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 FIZ1Q96SL8 496 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 CHRDQ9H2X0 955 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 PRMT8Q9NR22 394 aaPredicted RBP9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 GTSE1Q9NYZ3 720 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 CPSF3Q9UKF6 684 aaKnown RBP9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 MAFFQ9ULX9 164 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 USP18Q9UMW8 372 aa9.33□□□□□ -0.92
CTDNEP1-203ENST00000570385 CHURC1-FNTBB4DL54 471 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 ARNTLO00327 626 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 PIRO00625 290 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 DPYSL4O14531 572 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 CYB561D2O14569 222 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 LILRB5O75023 590 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 PIGRP01833 764 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 ADRB2P07550 413 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 CHRNB1P11230 501 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 ATF6P18850 670 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 TYMPP19971 482 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 FNTBP49356 437 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 ZNF131P52739 623 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms