RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 CACTINQ8WUQ7 758 aaKnown RBP14.07□□□□□ -0.16
CNOT1-220ENST00000569916 CYP4F11Q9HBI6 524 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 KIAA1586Q9HCI6 787 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 HCFC1R1Q9NWW0 138 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 CGNQ9P2M7 1197 aaKnown RBP14.07□□□□□ -0.16
CNOT1-220ENST00000569916 EPS15L1Q9UBC2 864 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 LIMD1Q9UGP4 676 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 ITGA11Q9UKX5 1188 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 POLIQ9UNA4 740 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 SORCS3Q9UPU3 1222 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 INSL5Q9Y5Q6 135 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 KMT2EQ8IZD2 1858 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 TRIOO75962 3097 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 OR6C75A6NL08 312 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 KPNA7A9QM74 516 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 TULP1O00294 542 aaPredicted RBP14.06□□□□□ -0.16
CNOT1-220ENST00000569916 CYB561D2O14569 222 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 PRRG1O14668 218 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 VNN2O95498 520 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 TMEM191BP0C7N4 346 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 FSHRP23945 695 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 ELF1P32519 619 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 PNPLA4P41247 253 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 CYP2J2P51589 502 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 ADCY1Q08828 1119 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 MYBPC2Q14324 1141 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 SURF1Q15526 300 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 TRIM67Q6ZTA4 783 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 LRRC52Q8N7C0 313 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 XXYLT1Q8NBI6 393 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 RDH13Q8NBN7 331 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 OR5B17Q8NGF7 314 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 OR10T2Q8NGX3 314 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 TMEM209Q96SK2 561 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 RTP3Q9BQQ7 232 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 SMOC2Q9H3U7 446 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 INTS13Q9NVM9 706 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.06□□□□□ -0.162e-12■□□□□ 9.9
CNOT1-220ENST00000569916 DNMT3BQ9UBC3 853 aaKnown RBP14.06□□□□□ -0.16
CNOT1-220ENST00000569916 SIX4Q9UIU6 781 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 DSEQ9UL01 958 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 MAFFQ9ULX9 164 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 AGAP1Q9UPQ3 857 aa14.06□□□□□ -0.16
CNOT1-220ENST00000569916 RHOBTB3O94955 611 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 LRG1P02750 347 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 CYP24A1Q07973 514 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 SIGLEC14Q08ET2 396 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 GPR17Q13304 367 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 MTMR3Q13615 1198 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 PSMD6Q15008 389 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 WSCD1Q658N2 575 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 WDR49Q8IV35 697 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 FMR1NBQ8N0W7 255 aaPredicted RBP14.05□□□□□ -0.16
CNOT1-220ENST00000569916 ITFG1Q8TB96 612 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 ANKRD36BP1Q96IX9 119 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 PGLYRP2Q96PD5 576 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 GZF1Q9H116 711 aaPredicted RBP14.05□□□□□ -0.16
CNOT1-220ENST00000569916 CRISPLD1Q9H336 500 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 KCTD10Q9H3F6 313 aa14.05□□□□□ -0.16
CNOT1-220ENST00000569916 MTMR11A4FU01 709 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 TMEM221A6NGB7 291 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 M0R296 226 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 TNNC2P02585 160 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 KRT19P08727 400 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 LAMP2P13473 410 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 COL9A1P20849 921 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 BFSP1Q12934 665 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 PABPC1LQ4VXU2 614 aaKnown RBP14.04□□□□□ -0.16
CNOT1-220ENST00000569916 HFE2Q6ZVN8 426 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 UBALD2Q8IYN6 164 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 CSGALNACT2Q8N6G5 542 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 ENGASEQ8NFI3 743 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 GOLGA5Q8TBA6 731 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 ASIC4Q96FT7 647 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 CGRRF1Q99675 332 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 KCNK12Q9HB15 430 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 YIPF1Q9Y548 306 aa14.04□□□□□ -0.16
CNOT1-220ENST00000569916 PDXKO00764 312 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 EXOC3O60645 756 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 RHOP08100 348 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 DLATP10515 647 aaKnown RBP14.03□□□□□ -0.16
CNOT1-220ENST00000569916 RBP5P82980 135 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 TWF1Q12792 350 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 SNW1Q13573 536 aaKnown RBP14.03□□□□□ -0.16
CNOT1-220ENST00000569916 KCNB1Q14721 858 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 DUOXA2Q1HG44 320 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 SLC5A9Q2M3M2 681 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 METTL23Q86XA0 190 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 SLC9A9Q8IVB4 645 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 TTC9BQ8N6N2 239 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 TMEM174Q8WUU8 243 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 FGF13Q92913 245 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 CCDC47Q96A33 483 aaKnown RBP14.03□□□□□ -0.16
CNOT1-220ENST00000569916 CCDC127Q96BQ5 260 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 MFSD14AQ96MC6 490 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 ZCWPW1Q9H0M4 648 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 AVENQ9NQS1 362 aaPredicted RBP14.03□□□□□ -0.16
CNOT1-220ENST00000569916 DMAC2Q9NW81 257 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 GDAP2Q9NXN4 497 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 CEP72Q9P209 647 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms