RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 NTPCRQ9BSD7 190 aaKnown RBP7.06□□□□□ -1.28
SMG1-217ENST00000569764 IFIH1Q9BYX4 1025 aaKnown RBP7.06□□□□□ -1.28
SMG1-217ENST00000569764 SRA1Q9HD15 236 aaKnown RBP7.06□□□□□ -1.28
SMG1-217ENST00000569764 NDFIP2Q9NV92 336 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 M0R3H8 397 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 NDUFAB1O14561 156 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 GDI1P31150 447 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 CTNNB1P35222 781 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 ACLYP53396 1101 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 GSCP56915 257 aaPredicted RBP7.06□□□□□ -1.28
SMG1-217ENST00000569764 TPM4P67936 248 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 ATAT1Q5SQI0 421 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 CEP135Q66GS9 1140 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 SPATA21Q7Z572 469 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 MICU3Q86XE3 530 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 CERS5Q8N5B7 392 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 MAFAQ8NHW3 353 aaPredicted RBP7.06□□□□□ -1.28
SMG1-217ENST00000569764 DEPTORQ8TB45 409 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 PIBF1Q8WXW3 757 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 MAML1Q92585 1016 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 ENTPD7Q9NQZ7 604 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 TRHDEQ9UKU6 1024 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 MAPK8IP1Q9UQF2 711 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 PCDHA11Q9Y5I1 949 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 AP1M2Q9Y6Q5 423 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 ARHGEF35A5YM69 484 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 ZBTB5O15062 677 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 ZW10O43264 779 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 THPOP40225 353 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 LLGL1Q15334 1064 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 ARMCX5Q6P1M9 558 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 NFRKBQ6P4R8 1299 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 ALKBH5Q6P6C2 394 aaKnown RBP7.06□□□□□ -1.28
SMG1-217ENST00000569764 MAP4K3Q8IVH8 894 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 RNF10Q8N5U6 811 aaKnown RBP7.06□□□□□ -1.28
SMG1-217ENST00000569764 ACMSDQ8TDX5 336 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 WDR24Q96S15 920 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 RHOBTB2Q9BYZ6 727 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 OLA1Q9NTK5 396 aaKnown RBP7.06□□□□□ -1.28
SMG1-217ENST00000569764 ABCF3Q9NUQ8 709 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 QPCTLQ9NXS2 382 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 MALT1Q9UDY8 824 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 ZC3H7BQ9UGR2 993 aaKnown RBP7.06□□□□□ -1.28
SMG1-217ENST00000569764 ITGB1BP2Q9UKP3 347 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 CLIC4Q9Y696 253 aa7.06□□□□□ -1.28
SMG1-217ENST00000569764 VWA5AO00534 786 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 URODP06132 367 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 CYP2C9P11712 490 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 HNRNPH2P55795 449 aaKnown RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 SGCGQ13326 291 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 SEC23AQ15436 765 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 TAF5Q15542 800 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 METTL11BQ5VVY1 283 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 NAXEQ8NCW5 288 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 TBC1D5Q92609 795 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 FAM198AQ9UFP1 575 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 ATRNL1Q5VV63 1379 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 SLX4Q8IY92 1834 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 TNKSO95271 1327 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 MAST2Q6P0Q8 1798 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 DDX60LQ5H9U9 1706 aaKnown RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 DDTLA6NHG4 134 aaPredicted RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 POTECB2RU33 542 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 PI4K2BG5E9Z4 385 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 CACNB4O00305 520 aaPredicted RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 WNT7AO00755 349 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 SEC31AO94979 1220 aaKnown RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 GGPS1O95749 300 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 NR3C2P08235 984 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 ENDOUP21128 410 aaKnown RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 U2AF2P26368 475 aaKnown RBP eCLIP7.05□□□□□ -1.28
SMG1-217ENST00000569764 S100A5P33763 92 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 KRT9P35527 623 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 GCKP35557 465 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 PSEN2P49810 448 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 UBE2HP62256 183 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 CAMK2BQ13554 666 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 PPP2R5EQ16537 467 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 PTGISQ16647 500 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 SLC5A9Q2M3M2 681 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 ARHGAP15Q53QZ3 475 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 PPP1R15BQ5SWA1 713 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 FAM109BQ6ICB4 259 aaPredicted RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 SPATC1Q76KD6 591 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 DEFB128Q7Z7B8 93 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 NPLOC4Q8TAT6 608 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 AFG1LQ8WV93 481 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 RAPGEF5Q92565 580 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 C16orf45Q96MC5 204 aaPredicted RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 LIN28AQ9H9Z2 209 aaKnown RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.05□□□□□ -1.28
SMG1-217ENST00000569764 PCDHAC2Q9Y5I4 1007 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 KRT87PA6NCN2 255 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 E2F3O00716 465 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 CTSHP09668 335 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 PDHBP11177 359 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 EIF2AK2P19525 551 aaKnown RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 POLGP54098 1239 aaPredicted RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 PMS1P54277 932 aaKnown RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 BASP1P80723 227 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms