RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 ARID2Q68CP9 1835 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 PASKQ96RG2 1323 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 MYH9P35579 1960 aaKnown RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 CCL15-CCL14A0A0B4J2E2 113 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 TCRBV5S1A1TA0A578 114 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 RRN3P2A6NIE6 340 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 SLC15A5A6NIM6 579 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 H0YGN5 161 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 MYO1FO00160 1098 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 HSF2BPO75031 334 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 PHF2O75151 1096 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 PROSCO94903 275 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 STAU1O95793 577 aaKnown RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 LGALS2P05162 132 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 PAEPP09466 180 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 FAM153BP0C7A2 387 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 RARAP10276 462 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 CYP2C8P10632 490 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 PYGMP11217 842 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 ZNF16P17020 682 aaPredicted RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 MMP8P22894 467 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 EIF4BP23588 611 aaKnown RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 MARK3P27448 753 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 TMOD1P28289 359 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 ADORA2AP29274 412 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 MAPK4P31152 587 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 TNFSF9P41273 254 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 PHKA2P46019 1235 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 NSFP46459 744 aaKnown RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 SERPINB4P48594 390 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 FNTAP49354 379 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 DNA2P51530 1060 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 HUNKP57058 714 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 MYL6P60660 151 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 YWHAEP62258 255 aaKnown RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 NOMO3P69849 1222 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 NOP14P78316 857 aaKnown RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 MRPS25P82663 173 aaKnown RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 DR1Q01658 176 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 TAP1Q03518 808 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 PPFIA1Q13136 1202 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 PTK7Q13308 1070 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 MAMLD1Q13495 774 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 GRB14Q14449 540 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 PCBP1Q15365 356 aaKnown RBP eCLIP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 SIX1Q15475 284 aaPredicted RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 TRADDQ15628 312 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 CCL15Q16663 113 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 FAM153CQ494X1 144 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 DUSP28Q4G0W2 176 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 TMEM63BQ5T3F8 832 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 CFAP58Q5T655 872 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 LRRC38Q5VT99 294 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 SPRYD7Q5W111 196 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 SPOPLQ6IQ16 392 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 MTHFD1LQ6UB35 978 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 TMEM270Q6UE05 265 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 SYDE1Q6ZW31 735 aaPredicted RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 PLEKHH3Q7Z736 793 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 NT5DC4Q86YG4 428 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 RASAL3Q86YV0 1011 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 RHPN2Q8IUC4 686 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 ZDHHC14Q8IZN3 488 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 LRRC71Q8N4P6 559 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 TTC39CQ8N584 583 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 GOLGA6L1Q8N7Z2 621 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 RBBP8NLQ8NC74 664 aaPredicted RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 TSEN2Q8NCE0 465 aaKnown RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 CXorf38Q8TB03 319 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 MAIP1Q8WWC4 291 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 CPA5Q8WXQ8 436 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 ZNF653Q96CK0 615 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 HINFPQ9BQA5 517 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 TINF2Q9BSI4 451 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 C16orf70Q9BSU1 422 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 PLVAPQ9BX97 442 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 IMPG2Q9BZV3 1241 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 NIF3L1Q9GZT8 377 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 ABHD16BQ9H3Z7 469 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 RPF1Q9H9Y2 349 aaKnown RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 CYP3A43Q9HB55 503 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 HOMER3Q9NSC5 361 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 PARVAQ9NVD7 372 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 ADAM22Q9P0K1 906 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 VPS18Q9P253 973 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 ANKFY1Q9P2R3 1169 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 AMACRQ9UHK6 382 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 FAM153AQ9UHL3 310 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 FEZ2Q9UHY8 353 aaPredicted RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 FKBPLQ9UIM3 349 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 MTUS1Q9ULD2 1270 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 KIAA1257Q9ULG3 409 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 UTP11Q9Y3A2 253 aaKnown RBP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.73□□□□□ -1.49
SF3B3-213ENST00000569687 NFS1Q9Y697 457 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 TRPM7Q96QT4 1865 aa5.73□□□□□ -1.49
SF3B3-213ENST00000569687 SIP14410 1827 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 A0A1B0GUA9 196 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 ESYT3A0FGR9 886 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms