RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 LRRC10BA6NIK2 292 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 KPNA7A9QM74 516 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 TMEM189-UBE2V1I3L0A0 370 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 PMM2O15305 246 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 TBX10O75333 385 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 FGF18O76093 207 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 CST3P01034 146 aaPredicted RBP17.22■□□□□ 0.35
USB1-215ENST00000569252 HLA-DRAP01903 254 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 ZNF18P17022 549 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 PBX3P40426 434 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 MRE11P49959 708 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 COPB1P53618 953 aaKnown RBP17.22■□□□□ 0.35
USB1-215ENST00000569252 LILRA4P59901 499 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 PLCB2Q00722 1185 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 PLCB3Q01970 1234 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 NHLH1Q02575 133 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 PTPROQ16827 1216 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 C1orf220Q5T0J3 134 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 METTL23Q86XA0 190 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 SLC39A11Q8N1S5 342 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 KLHL23Q8NBE8 558 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 HASPINQ8TF76 798 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 PCMTD1Q96MG8 357 aaPredicted RBP17.22■□□□□ 0.35
USB1-215ENST00000569252 PAAF1Q9BRP4 392 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 CACNG4Q9UBN1 327 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 SSX2IPQ9Y2D8 614 aa17.22■□□□□ 0.35
USB1-215ENST00000569252 ARIH1Q9Y4X5 557 aaPredicted RBP17.22■□□□□ 0.35
USB1-215ENST00000569252 FNDC1Q4ZHG4 1894 aaPredicted RBP17.22■□□□□ 0.35
USB1-215ENST00000569252 HUS1O60921 280 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 KIF4AO95239 1232 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 MYL6P60660 151 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 UBXN1Q04323 297 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 ZNF699Q32M78 642 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 WDR72Q3MJ13 1102 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 CBWD6Q4V339 395 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 ZNF667Q5HYK9 610 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 CBWD3Q5JTY5 395 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 CBWD5Q5RIA9 395 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 C15orf39Q6ZRI6 1047 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 EHBP1Q8NDI1 1231 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 APPL2Q8NEU8 664 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 TAS1R2Q8TE23 839 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 MMS19Q96T76 1030 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 DNAI2Q9GZS0 605 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 ALG13Q9NP73 1137 aaKnown RBP17.21■□□□□ 0.35
USB1-215ENST00000569252 NXF1Q9UBU9 619 aaKnown RBP17.21■□□□□ 0.35
USB1-215ENST00000569252 DSEQ9UL01 958 aa17.21■□□□□ 0.35
USB1-215ENST00000569252 TDRD15B5MCY1 1934 aaKnown RBP17.21■□□□□ 0.35
USB1-215ENST00000569252 C5orf67F2Z3F1 127 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 CYB561D2O14569 222 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 CBFA2T2O43439 604 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 ODC1P11926 461 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 ATP1A3P13637 1013 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 DNAJB1P25685 340 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 CA8P35219 290 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 UBASH3AP57075 661 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 UBE3AQ05086 875 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 EXOC3L4Q17RC7 722 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 USP41Q3LFD5 358 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 FAM171A1Q5VUB5 890 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 FUT10Q6P4F1 479 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 ADGRD2Q7Z7M1 963 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 DDX53Q86TM3 631 aaKnown RBP17.2■□□□□ 0.34
USB1-215ENST00000569252 CEP57Q86XR8 500 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 MICAL1Q8TDZ2 1067 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 SIX4Q9UIU6 781 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 SNX9Q9Y5X1 595 aa17.2■□□□□ 0.34
USB1-215ENST00000569252 GTPBP10A4D1E9 387 aaKnown RBP17.19■□□□□ 0.34
USB1-215ENST00000569252 C19orf67A6NJJ6 358 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 B4GALT3O60512 393 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 STAU1O95793 577 aaKnown RBP17.19■□□□□ 0.34
USB1-215ENST00000569252 ALADP13716 330 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 TRIM21P19474 475 aaKnown RBP17.19■□□□□ 0.34
USB1-215ENST00000569252 FANCCQ00597 558 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 CAMK1Q14012 370 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 COL19A1Q14993 1142 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 PDXDC1Q6P996 788 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 TMC7Q7Z402 723 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 THEM5Q8N1Q8 247 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 FAM84AQ96KN4 292 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 SENP8Q96LD8 212 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 FAM81BQ96LP2 452 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 RBSNQ9H1K0 784 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 GCNT4Q9P109 453 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 LZTS1Q9Y250 596 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 COQ4Q9Y3A0 265 aa17.19■□□□□ 0.34
USB1-215ENST00000569252 PPEF2O14830 753 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 SYN3O14994 580 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 MBTPS2O43462 519 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 VNN1O95497 513 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 BRCC3P46736 316 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 RBM10P98175 930 aaKnown RBP17.18■□□□□ 0.34
USB1-215ENST00000569252 UVSSAQ2YD98 709 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 MIIPQ5JXC2 388 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 DPH6Q7L8W6 267 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 ADHFE1Q8IWW8 467 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 VPS52Q8N1B4 723 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 POF1BQ8WVV4 589 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 SUSD3Q96L08 255 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 NT5C1BQ96P26 610 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms