RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 TAF12Q16514 161 aa11.19□□□□□ -0.62
UBR1-207ENST00000568782 CRELD2Q6UXH1 353 aaPredicted RBP11.19□□□□□ -0.62
UBR1-207ENST00000568782 RSPO2Q6UXX9 243 aaPredicted RBP11.19□□□□□ -0.62
UBR1-207ENST00000568782 PDZD4Q76G19 769 aaPredicted RBP11.19□□□□□ -0.62
UBR1-207ENST00000568782 DCP1BQ8IZD4 617 aaKnown RBP11.19□□□□□ -0.62
UBR1-207ENST00000568782 ZNF507Q8TCN5 953 aa11.19□□□□□ -0.62
UBR1-207ENST00000568782 LEO1Q8WVC0 666 aaPredicted RBP11.19□□□□□ -0.62
UBR1-207ENST00000568782 CORO1BQ9BR76 489 aa11.19□□□□□ -0.62
UBR1-207ENST00000568782 CBWD1Q9BRT8 395 aa11.19□□□□□ -0.62
UBR1-207ENST00000568782 IRF2BPLQ9H1B7 796 aa11.19□□□□□ -0.62
UBR1-207ENST00000568782 SLC39A2Q9NP94 309 aa11.19□□□□□ -0.62
UBR1-207ENST00000568782 SERTAD1Q9UHV2 236 aa11.19□□□□□ -0.62
UBR1-207ENST00000568782 ITGA11Q9UKX5 1188 aa11.19□□□□□ -0.62
UBR1-207ENST00000568782 DUSP12Q9UNI6 340 aa11.19□□□□□ -0.62
UBR1-207ENST00000568782 AGAP1Q9UPQ3 857 aa11.19□□□□□ -0.62
UBR1-207ENST00000568782 INSL5Q9Y5Q6 135 aa11.19□□□□□ -0.62
UBR1-207ENST00000568782 TECTAO75443 2155 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 ANO9A1A5B4 782 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 TBC1D4O60343 1298 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 CLSTN1O94985 981 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 ITGB3P05106 788 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 RHOP08100 348 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 PFKFB1P16118 471 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 TNNI1P19237 187 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 TUFMP49411 452 aaKnown RBP11.18□□□□□ -0.62
UBR1-207ENST00000568782 MYL7Q01449 175 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 TWF1Q12792 350 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 CUL4BQ13620 913 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 VEPH1Q14D04 833 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 KNOP1Q1ED39 458 aaKnown RBP11.18□□□□□ -0.62
UBR1-207ENST00000568782 DUOXA2Q1HG44 320 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 RNF19BQ6ZMZ0 732 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 ITIH5Q86UX2 942 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 NELFCDQ8IXH7 590 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 XXYLT1Q8NBI6 393 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 RDH13Q8NBN7 331 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 FAM200AQ8TCP9 573 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 C2orf15Q8WU43 125 aaKnown RBP11.18□□□□□ -0.62
UBR1-207ENST00000568782 FGF13Q92913 245 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 HPS3Q969F9 1004 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 PAGE5Q96GU1 130 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 MYADMQ96S97 322 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 ASAH2Q9NR71 780 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 GDE1Q9NZC3 331 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 HSPBP1Q9NZL4 362 aa11.18□□□□□ -0.62
UBR1-207ENST00000568782 DNMT3BQ9UBC3 853 aaKnown RBP11.18□□□□□ -0.62
UBR1-207ENST00000568782 CLIC2O15247 247 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 EXOC3O60645 756 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 FGF19O95750 216 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 CYP11A1P05108 521 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 SRFP11831 508 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 POLR2BP30876 1174 aaKnown RBP11.17□□□□□ -0.62
UBR1-207ENST00000568782 CYP2J2P51589 502 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 NTHL1P78549 312 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 BFSP1Q12934 665 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 SNRNP35Q16560 246 aaKnown RBP11.17□□□□□ -0.62
UBR1-207ENST00000568782 TMEM86AQ8N2M4 240 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 SLC44A3Q8N4M1 653 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 LRRC52Q8N7C0 313 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 FSIP1Q8NA03 581 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 SHDQ96IW2 340 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 PGLYRP2Q96PD5 576 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 GPR88Q9GZN0 384 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 IKZF4Q9H2S9 585 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 SLITRK6Q9H5Y7 841 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 PDE11AQ9HCR9 933 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 HCFC1R1Q9NWW0 138 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 HSFX1Q9UBD0 423 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 WNT16Q9UBV4 365 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 HOOK1Q9UJC3 728 aaKnown RBP11.17□□□□□ -0.62
UBR1-207ENST00000568782 ASB3Q9Y575 518 aa11.17□□□□□ -0.62
UBR1-207ENST00000568782 ZNF638Q14966 1978 aaKnown RBP11.17□□□□□ -0.62
UBR1-207ENST00000568782 A0A1W2PQ27 194 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 A0A1W2PQ64 194 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 A0A1W2PQD8 194 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 PPEF2O14830 753 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 N4BP1O75113 896 aaKnown RBP11.16□□□□□ -0.62
UBR1-207ENST00000568782 PHACTR2O75167 634 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 MICAL2O94851 1124 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 SEC24AO95486 1093 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 CFHP08603 1231 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 OR4Q2P0C623 313 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 DLATP10515 647 aaKnown RBP11.16□□□□□ -0.62
UBR1-207ENST00000568782 MYL4P12829 197 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 LHX1P48742 406 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 NUBP1P53384 320 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 PFKPQ01813 784 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 DUSP4Q13115 394 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 TRPC3Q13507 836 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 NFE2Q16621 373 aaPredicted RBP11.16□□□□□ -0.62
UBR1-207ENST00000568782 MGAT5BQ3V5L5 792 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 SLC39A12Q504Y0 691 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 EPM2AIP1Q7L775 607 aaPredicted RBP11.16□□□□□ -0.62
UBR1-207ENST00000568782 WDR49Q8IV35 697 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 EFCAB13Q8IY85 973 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 FLCNQ8NFG4 579 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 SPPL2BQ8TCT7 592 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 SCFD1Q8WVM8 642 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 ING5Q8WYH8 240 aa11.16□□□□□ -0.62
UBR1-207ENST00000568782 MCRS1Q96EZ8 462 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms