RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 CRISPLD1Q9H336 500 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 ATXN3LQ9H3M9 355 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 KMT5AQ9NQR1 393 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 RBM19Q9Y4C8 960 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 ASB3Q9Y575 518 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 SPEGQ15772 3267 aa12.87□□□□□ -0.35
GTF3C1-209ENST00000568569 ZZEF1O43149 2961 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 OR6C75A6NL08 312 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 M0QZQ0 153 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 EXTL3O43909 919 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 JAK2O60674 1132 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 TOM1L1O75674 476 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 HOXC13P31276 330 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 GPR17Q13304 367 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 NOLC1Q14978 699 aaKnown RBP eCLIP12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 ZNF174Q15697 407 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 ME3Q16798 604 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 SLC10A6Q3KNW5 377 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 ARHGAP15Q53QZ3 475 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 PLA2G2CQ5R387 149 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 GPR158Q5T848 1215 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 GAREM2Q75VX8 874 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 DNAJB7Q7Z6W7 309 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 KBTBD6Q86V97 674 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 GPIHBP1Q8IV16 184 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 BPIFB1Q8TDL5 484 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 PSMG2Q969U7 264 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 DRC1Q96MC2 740 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 TMEM209Q96SK2 561 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 LSM14BQ9BX40 385 aaKnown RBP12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 C17orf75Q9HAS0 396 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 DDX19AQ9NUU7 478 aaKnown RBP12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 ANKFY1Q9P2R3 1169 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 RALYQ9UKM9 306 aaKnown RBP12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 KIAA1024Q9UPX6 916 aa12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 TIMM13Q9Y5L4 95 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-209ENST00000568569 BAHCC1Q9P281 2608 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 ATG13O75143 517 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 HIP1RO75146 1068 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 AKAP3O75969 853 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 KCNK5O95279 499 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 PROS1P07225 676 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 GABRR2P28476 465 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 WEE1P30291 646 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 LRPAP1P30533 357 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 MPLP40238 635 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 PXNP49023 591 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 AARSP49588 968 aaKnown RBP eCLIP12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.353e-8■■■□□ 18
GTF3C1-209ENST00000568569 TNK2Q07912 1038 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 STRN3Q13033 797 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 MYBPC2Q14324 1141 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 PTPAQ15257 358 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 ITPRIPL2Q3MIP1 535 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 CENPPQ6IPU0 288 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 ITIH5Q86UX2 942 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 DAW1Q8N136 415 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 ZBTB45Q96K62 511 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 PLEKHA5Q9HAU0 1116 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 VPS45Q9NRW7 570 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 THG1LQ9NWX6 298 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 SLC8A2Q9UPR5 921 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
GTF3C1-209ENST00000568569 MTMR11A4FU01 709 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 LARGE1O95461 756 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 PRAMEF12O95522 483 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 CXCL8P10145 99 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 MCM2P49736 904 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 ANAPC15P60006 121 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 CACNB1Q02641 598 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 GRSF1Q12849 480 aaKnown RBP eCLIP12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 SEZ6Q53EL9 994 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 RNF43Q68DV7 783 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 OVOS1Q6IE37 1185 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 PSAPL1Q6NUJ1 521 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 PKN3Q6P5Z2 889 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 ATAD1Q8NBU5 361 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 SNX29Q8TEQ0 813 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 ZC3H10Q96K80 434 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 GCNAQ96QF7 691 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 TASP1Q9H6P5 420 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 HSFX1Q9UBD0 423 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 LRWD1Q9UFC0 647 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 UBQLN1Q9UMX0 589 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 DNM3Q9UQ16 869 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 SLC27A5Q9Y2P5 690 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 RALGAPA1Q6GYQ0 2036 aa12.84□□□□□ -0.35
GTF3C1-209ENST00000568569 TRIP11Q15643 1979 aa12.83□□□□□ -0.35
GTF3C1-209ENST00000568569 ZFYVE26Q68DK2 2539 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 SLC16A4O15374 487 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 CLDN3O15551 220 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 XPOTO43592 962 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 CLTAP09496 248 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 TYMPP19971 482 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 CYP3A5P20815 502 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 CDC25CP30307 473 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 GUCY1B3Q02153 619 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 SPAG1Q07617 926 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms