RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-219	ENST00000568382	TAF6	P49848	677 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	ARPP19	P56211	112 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	YWHAH	Q04917	246 aa	Predicted RBP	13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	SURF1	Q15526	300 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	CYP26C1	Q6V0L0	522 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	RNF135	Q8IUD6	432 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	CSGALNACT2	Q8N6G5	542 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	OR5B17	Q8NGF7	314 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	SMG7	Q92540	1137 aa	Known RBP	13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	MFSD14A	Q96MC6	490 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	TSG101	Q99816	390 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	RHOBTB2	Q9BYZ6	727 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	PRKD2	Q9BZL6	878 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	MTMR12	Q9C0I1	747 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	EPHX3	Q9H6B9	360 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	INTS13	Q9NVM9	706 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	DMAC2	Q9NW81	257 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	ZDHHC7	Q9NXF8	308 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	AGAP1	Q9UPQ3	857 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	MAPK8IP1	Q9UQF2	711 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	TTC28	Q96AY4	2481 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	BICDL2	A1A5D9	508 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	KPNA7	A9QM74	516 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	PI4K2B	G5E9Z4	385 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	PDXK	O00764	312 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	CYB561D2	O14569	222 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	GALR2	O43603	387 aa	Predicted RBP	13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	EXOC3	O60645	756 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	NCOR1	O75376	2440 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	C8A	P07357	584 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	RPL13	P26373	211 aa	Known RBP	13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	POLR2B	P30876	1174 aa	Known RBP	13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	NUBP1	P53384	320 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	CYP24A1	Q07973	514 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	PSMD6	Q15008	389 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	DUOXA2	Q1HG44	320 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	UVSSA	Q2YD98	709 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	PPM1L	Q5SGD2	360 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	OVOS1	Q6IE37	1185 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	ZNF280D	Q6N043	979 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	USP37	Q86T82	979 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	SLC7A14	Q8TBB6	771 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	TMEM174	Q8WUU8	243 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	ERCC4	Q92889	916 aa	Predicted RBP	13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	CCDC127	Q96BQ5	260 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	GZF1	Q9H116	711 aa	Predicted RBP	13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	PIDD1	Q9HB75	910 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	SIX4	Q9UIU6	781 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	ITGA11	Q9UKX5	1188 aa		13.26	□□□□□ -0.29
SCAPER-219	ENST00000568382	TSC2	P49815	1807 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	C2CD4D	B7Z1M9	353 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	BIN1	O00499	593 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	CALU	O43852	315 aa	Predicted RBP	13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	SEC24A	O95486	1093 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	CYP11A1	P05108	521 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	KRT19	P08727	400 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	OR4Q2	P0C623	313 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	TMEM191B	P0C7N4	346 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	ODC1	P11926	461 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	ATF2	P15336	505 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	NLRP12	P59046	1061 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	RBP5	P82980	135 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	MORC3	Q14149	939 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	STX1A	Q16623	288 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	SV2C	Q496J9	727 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	COBLL1	Q53SF7	1204 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	LIN9	Q5TKA1	542 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	RNF19B	Q6ZMZ0	732 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	WDR49	Q8IV35	697 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	SLC9A9	Q8IVB4	645 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	GUF1	Q8N442	669 aa	Known RBP	13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	ZNF516	Q92618	1163 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	ANKRD36BP1	Q96IX9	119 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	WDR6	Q9NNW5	1121 aa	Known RBP	13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	MAN1B1	Q9UKM7	699 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	TRAF3IP3	Q9Y228	551 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	NR2E1	Q9Y466	385 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	MYO10	Q9HD67	2058 aa		13.25	□□□□□ -0.29
SCAPER-219	ENST00000568382	NOTCH4	Q99466	2003 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	CCL16	O15467	120 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	VNN2	O95498	520 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	CST3	P01034	146 aa	Predicted RBP	13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	TNNC2	P02585	160 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	NR3C1	P04150	777 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	DLAT	P10515	647 aa	Known RBP	13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	TNNI1	P19237	187 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	HOXA9	P31269	272 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	ELF1	P32519	619 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	PNPLA4	P41247	253 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	CASP4	P49662	377 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	ADCY1	Q08828	1119 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	TPD52L1	Q16890	204 aa	Predicted RBP	13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	WSCD1	Q658N2	575 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	TPGS2	Q68CL5	300 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	RBM43	Q6ZSC3	357 aa	Known RBP	13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms