RNA–Protein interactions for RNA: ENST00000567742.1

AP000439.4-201, humanhuman

TSL 3 BASIC

Gene AP000439.4, Length 664 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.4-201ENST00000567742 CT47A1Q5JQC4 288 aaPredicted RBP16.3■□□□□ 0.2
AP000439.4-201ENST00000567742 TDRD10Q5VZ19 366 aaKnown RBP16.3■□□□□ 0.2
AP000439.4-201ENST00000567742 OVOS1Q6IE37 1185 aa16.3■□□□□ 0.2
AP000439.4-201ENST00000567742 ANKRD54Q6NXT1 300 aa16.3■□□□□ 0.2
AP000439.4-201ENST00000567742 SPATA18Q8TC71 538 aa16.3■□□□□ 0.2
AP000439.4-201ENST00000567742 HPDLQ96IR7 371 aa16.3■□□□□ 0.2
AP000439.4-201ENST00000567742 FAM84AQ96KN4 292 aa16.3■□□□□ 0.2
AP000439.4-201ENST00000567742 DUSP9Q99956 384 aaKnown RBP16.3■□□□□ 0.2
AP000439.4-201ENST00000567742 CLEC1BQ9P126 229 aa16.3■□□□□ 0.2
AP000439.4-201ENST00000567742 CD207Q9UJ71 328 aa16.3■□□□□ 0.2
AP000439.4-201ENST00000567742 CDY1Q9Y6F8 540 aa16.3■□□□□ 0.2
AP000439.4-201ENST00000567742 SPDYE4A6NLX3 237 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 TGM5O43548 720 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 TBC1D4O60343 1298 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 HUS1O60921 280 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 STAU1O95793 577 aaKnown RBP16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 GNA14O95837 355 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 CST3P01034 146 aaPredicted RBP16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 GTF2H1P32780 548 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 OR1D2P34982 312 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 ZACNQ401N2 412 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 CCDC40Q4G0X9 1142 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 SLC8B1Q6J4K2 584 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 DPH6Q7L8W6 267 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 FRMD5Q7Z6J6 570 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 PALB2Q86YC2 1186 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 TMEM86AQ8N2M4 240 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 TOP6BLQ8N6T0 577 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 EEF2KMTQ96G04 330 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 MSLNLQ96KJ4 702 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 PLEKHA4Q9H4M7 779 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 ARMCX3Q9UH62 379 aaPredicted RBP16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 FBXL5Q9UKA1 691 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 TIMM13Q9Y5L4 95 aaPredicted RBP16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 SNX9Q9Y5X1 595 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 DENND4AQ7Z401 1863 aa16.29■□□□□ 0.2
AP000439.4-201ENST00000567742 OR6C75A6NL08 312 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 H3BQ06 376 aaPredicted RBP16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 TRIM49P0CI25 452 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 TRIM49CP0CI26 452 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 RBM10P98175 930 aaKnown RBP16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 TFF2Q03403 129 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 DPCR1Q3MIW9 517 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 C1orf220Q5T0J3 134 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 KRT39Q6A163 491 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 LILRA6Q6PI73 481 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 SASS6Q6UVJ0 657 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 C15orf39Q6ZRI6 1047 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 SV2AQ7L0J3 742 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 THEM5Q8N1Q8 247 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 VRTNQ9H8Y1 702 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 SFXN1Q9H9B4 322 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 TMEM8AQ9HCN3 771 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 MAN1C1Q9NR34 630 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 FAM50BQ9Y247 325 aa16.28■□□□□ 0.2
AP000439.4-201ENST00000567742 PTPRDP23468 1912 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 PRUNE2Q8WUY3 3088 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 ERCC5P28715 1186 aaPredicted RBP16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 TNNC1P63316 161 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 ROR1Q01973 937 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 ITIH3Q06033 890 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 SMAD4Q13485 552 aaKnown RBP16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 NCOA4Q13772 614 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 SGSM1Q2NKQ1 1148 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 DCAF17Q5H9S7 520 aaPredicted RBP16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 TCERG1LQ5VWI1 586 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 TPGS2Q68CL5 300 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 SCARA3Q6AZY7 606 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 RSPO2Q6UXX9 243 aaPredicted RBP16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 RTL10Q7L3V2 364 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 SMRP1Q8NCR6 262 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 KREMEN2Q8NCW0 462 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 ZNF461Q8TAF7 563 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 TAF4BQ92750 862 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 SRRTQ9BXP5 876 aaKnown RBP16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 IMPG2Q9BZV3 1241 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 TMEM63CQ9P1W3 806 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 FBXW11Q9UKB1 542 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 MAFFQ9ULX9 164 aa16.27■□□□□ 0.2
AP000439.4-201ENST00000567742 MYH10P35580 1976 aa16.27■□□□□ 0.19
AP000439.4-201ENST00000567742 WDR27A2RRH5 827 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 ADAM12O43184 909 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 MBTPS2O43462 519 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 ABLIM3O94929 683 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 CLSTN1O94985 981 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 FAM163BP0C2L3 166 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 CCDC192P0DO97 292 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 CPB1P15086 417 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 PIK3CAP42336 1068 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 GCLMP48507 274 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 LHX1P48742 406 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 MXI1P50539 228 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 MARSP56192 900 aaKnown RBP16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 MYL6P60660 151 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 MYL7Q01449 175 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 PPP3CAQ08209 521 aa16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 TPD52L1Q16890 204 aaPredicted RBP16.26■□□□□ 0.19
AP000439.4-201ENST00000567742 ZNF699Q32M78 642 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms