RNA–Protein interactions for RNA: ENST00000567264.1

UBFD1-208, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBFD1, Length 642 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-208ENST00000567264 POLIQ9UNA4 740 aa24.35■■□□□ 1.49
UBFD1-208ENST00000567264 SSX2IPQ9Y2D8 614 aa24.35■■□□□ 1.49
UBFD1-208ENST00000567264 RFXAPO00287 272 aa24.34■■□□□ 1.49
UBFD1-208ENST00000567264 CSPG5O95196 566 aa24.34■■□□□ 1.49
UBFD1-208ENST00000567264 CA8P35219 290 aa24.34■■□□□ 1.49
UBFD1-208ENST00000567264 LRMPQ12912 555 aa24.34■■□□□ 1.49
UBFD1-208ENST00000567264 GPR153Q6NV75 609 aa24.34■■□□□ 1.49
UBFD1-208ENST00000567264 DPH6Q7L8W6 267 aa24.34■■□□□ 1.49
UBFD1-208ENST00000567264 LMO3Q8TAP4 145 aa24.34■■□□□ 1.49
UBFD1-208ENST00000567264 MICAL1Q8TDZ2 1067 aa24.34■■□□□ 1.49
UBFD1-208ENST00000567264 TCF25Q9BQ70 676 aa24.34■■□□□ 1.49
UBFD1-208ENST00000567264 APOBEC3GQ9HC16 384 aaKnown RBP24.34■■□□□ 1.49
UBFD1-208ENST00000567264 CHST7Q9NS84 486 aa24.34■■□□□ 1.49
UBFD1-208ENST00000567264 L1RE1Q9UN81 338 aa24.34■■□□□ 1.49
UBFD1-208ENST00000567264 TIMM13Q9Y5L4 95 aaPredicted RBP24.34■■□□□ 1.49
UBFD1-208ENST00000567264 LPXNO60711 386 aa24.33■■□□□ 1.49
UBFD1-208ENST00000567264 CTSAP10619 480 aa24.33■■□□□ 1.49
UBFD1-208ENST00000567264 DNAJB1P25685 340 aa24.33■■□□□ 1.49
UBFD1-208ENST00000567264 DSG1Q02413 1049 aa24.33■■□□□ 1.49
UBFD1-208ENST00000567264 YWHAHQ04917 246 aaPredicted RBP24.33■■□□□ 1.49
UBFD1-208ENST00000567264 PTPROQ16827 1216 aa24.33■■□□□ 1.49
UBFD1-208ENST00000567264 RTP2Q5QGT7 225 aa24.33■■□□□ 1.49
UBFD1-208ENST00000567264 PDXDC1Q6P996 788 aa24.33■■□□□ 1.49
UBFD1-208ENST00000567264 SCARA5Q6ZMJ2 495 aa24.33■■□□□ 1.49
UBFD1-208ENST00000567264 TMEM86AQ8N2M4 240 aa24.33■■□□□ 1.49
UBFD1-208ENST00000567264 RIN2Q8WYP3 895 aaPredicted RBP24.33■■□□□ 1.49
UBFD1-208ENST00000567264 FAXDC2Q96IV6 333 aa24.33■■□□□ 1.49
UBFD1-208ENST00000567264 PRDM12Q9H4Q4 367 aa24.33■■□□□ 1.49
UBFD1-208ENST00000567264 NGRNQ9NPE2 291 aaKnown RBP24.33■■□□□ 1.49
UBFD1-208ENST00000567264 RTN4Q9NQC3 1192 aaKnown RBP24.33■■□□□ 1.49
UBFD1-208ENST00000567264 MRPL17Q9NRX2 175 aaKnown RBP24.33■■□□□ 1.49
UBFD1-208ENST00000567264 A0A1B0GTH6 734 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 C2CD2LO14523 706 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 CYP11A1P05108 521 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 SLC9A1P19634 815 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 UBASH3AP57075 661 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 ERVFC1P60507 584 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 SMC1AQ14683 1233 aaKnown RBP24.32■■□□□ 1.48
UBFD1-208ENST00000567264 GRIN2CQ14957 1233 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 SOWAHAQ2M3V2 549 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 VARS2Q5ST30 1063 aaKnown RBP24.32■■□□□ 1.48
UBFD1-208ENST00000567264 WSCD1Q658N2 575 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 OVOS1Q6IE37 1185 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 PDE12Q6L8Q7 609 aaKnown RBP24.32■■□□□ 1.48
UBFD1-208ENST00000567264 TRIM65Q6PJ69 517 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 ANKS3Q6ZW76 656 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 ADGRF2Q8IZF7 708 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 PDCL2Q8N4E4 241 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 PIK3R5Q8WYR1 880 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 TATDN2Q93075 761 aa24.32■■□□□ 1.48
UBFD1-208ENST00000567264 PCMTD1Q96MG8 357 aaPredicted RBP24.32■■□□□ 1.48
UBFD1-208ENST00000567264 COL4A4P53420 1690 aaPredicted RBP24.31■■□□□ 1.48
UBFD1-208ENST00000567264 H7C4K7 107 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 CXCL14O95715 111 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 TPM3P06753 285 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 PON1P27169 355 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 ASPAP45381 313 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 PLCB2Q00722 1185 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 KIAA0319Q5VV43 1072 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 PLPP4Q5VZY2 271 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 ZNF280DQ6N043 979 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 GPR65Q8IYL9 337 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 SPATA18Q8TC71 538 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 AUTS2Q8WXX7 1259 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 FAM161BQ96MY7 647 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 NAP1L5Q96NT1 182 aaPredicted RBP24.31■■□□□ 1.48
UBFD1-208ENST00000567264 SMYD3Q9H7B4 428 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 CYP3A43Q9HB55 503 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 IFNKQ9P0W0 207 aa24.31■■□□□ 1.48
UBFD1-208ENST00000567264 LAMA3Q16787 3333 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.3■■□□□ 1.48
UBFD1-208ENST00000567264 CBFA2T2O43439 604 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 TACC1O75410 805 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 FAM163BP0C2L3 166 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 TBXAS1P24557 533 aaPredicted RBP24.3■■□□□ 1.48
UBFD1-208ENST00000567264 CREMQ03060 361 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 KCNMA1Q12791 1236 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 CAMK1Q14012 370 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 SYCP1Q15431 976 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 PTPN14Q15678 1187 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 PSMD5Q16401 504 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 PRSS55Q6UWB4 352 aaPredicted RBP24.3■■□□□ 1.48
UBFD1-208ENST00000567264 LIMS2Q7Z4I7 341 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 THEM5Q8N1Q8 247 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 PPM1KQ8N3J5 372 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 LSM14BQ9BX40 385 aaKnown RBP24.3■■□□□ 1.48
UBFD1-208ENST00000567264 SNX25Q9H3E2 840 aa24.3■■□□□ 1.48
UBFD1-208ENST00000567264 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.3■■□□□ 1.48
UBFD1-208ENST00000567264 FSCN2O14926 492 aa24.29■■□□□ 1.48
UBFD1-208ENST00000567264 TEX33O43247 280 aa24.29■■□□□ 1.48
UBFD1-208ENST00000567264 OAZ2O95190 189 aa24.29■■□□□ 1.48
UBFD1-208ENST00000567264 WARSP23381 471 aaKnown RBP24.29■■□□□ 1.48
UBFD1-208ENST00000567264 IRS1P35568 1242 aa24.29■■□□□ 1.48
UBFD1-208ENST00000567264 RAP1GAPP47736 663 aa24.29■■□□□ 1.48
UBFD1-208ENST00000567264 LHX1P48742 406 aa24.29■■□□□ 1.48
UBFD1-208ENST00000567264 CUL2Q13617 745 aa24.29■■□□□ 1.48
UBFD1-208ENST00000567264 NR1I3Q14994 352 aa24.29■■□□□ 1.48
UBFD1-208ENST00000567264 CTXN3Q4LDR2 81 aa24.29■■□□□ 1.48
UBFD1-208ENST00000567264 LNX1Q8TBB1 728 aaPredicted RBP24.29■■□□□ 1.48
UBFD1-208ENST00000567264 MRPL38Q96DV4 380 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms