RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 EFHBQ8N7U6 833 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 FBXL13Q8NEE6 735 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 CXorf38Q8TB03 319 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 LNX1Q8TBB1 728 aaPredicted RBP13.08□□□□□ -0.32
SF3B3-208ENST00000567250 ENOX1Q8TC92 643 aaKnown RBP13.08□□□□□ -0.32
SF3B3-208ENST00000567250 AUTS2Q8WXX7 1259 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 ZNF516Q92618 1163 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 SLC35C1Q96A29 364 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 B3GALT6Q96L58 329 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 DNAJC25Q9H1X3 360 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 VRTNQ9H8Y1 702 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 RXFP1Q9HBX9 757 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 NFE2L3Q9Y4A8 694 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 PCDHGC5Q9Y5F6 944 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.08□□□□□ -0.32
SF3B3-208ENST00000567250 SNX9Q9Y5X1 595 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 BACE2Q9Y5Z0 518 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 OR6C75A6NL08 312 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 CYB561D2O14569 222 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 SPTLC1O15269 473 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 LILRB3O75022 631 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 CAVIN2O95810 425 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 GLUD1P00367 558 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 TPM2P07951 284 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 CNPP09543 421 aaKnown RBP13.07□□□□□ -0.32
SF3B3-208ENST00000567250 KLRC2P26717 231 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 MYL7Q01449 175 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 PPP3CAQ08209 521 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 SGSM1Q2NKQ1 1148 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 ZSCAN23Q3MJ62 389 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 ANO6Q4KMQ2 910 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 CTXN3Q4LDR2 81 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 C1orf220Q5T0J3 134 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 C11orf57Q6ZUT1 292 aaPredicted RBP13.07□□□□□ -0.32
SF3B3-208ENST00000567250 RBM23Q86U06 439 aaKnown RBP13.07□□□□□ -0.32
SF3B3-208ENST00000567250 TRIM59Q8IWR1 403 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 THEM5Q8N1Q8 247 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 ANKRD20A12PQ8NF67 263 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 PPM1EQ8WY54 764 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 CASP10Q92851 521 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 PABPC5Q96DU9 382 aaKnown RBP13.07□□□□□ -0.32
SF3B3-208ENST00000567250 FAM84AQ96KN4 292 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 KLHL5Q96PQ7 755 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 BPIFA3Q9BQP9 254 aa13.07□□□□□ -0.32
SF3B3-208ENST00000567250 EYSQ5T1H1 3165 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 P4HA2O15460 535 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 TEX28O15482 410 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 CLASP2O75122 1294 aaKnown RBP13.06□□□□□ -0.32
SF3B3-208ENST00000567250 OAZ2O95190 189 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 HLA-DRAP01903 254 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 AFPP02771 609 aaKnown RBP13.06□□□□□ -0.32
SF3B3-208ENST00000567250 TRIM21P19474 475 aaKnown RBP13.06□□□□□ -0.32
SF3B3-208ENST00000567250 EEF1GP26641 437 aaKnown RBP13.06□□□□□ -0.32
SF3B3-208ENST00000567250 MTIF2P46199 727 aaKnown RBP13.06□□□□□ -0.32
SF3B3-208ENST00000567250 FMO5P49326 533 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 MYL6P60660 151 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 HYAL1Q12794 435 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 CCDC85BQ15834 202 aaPredicted RBP13.06□□□□□ -0.32
SF3B3-208ENST00000567250 WDR72Q3MJ13 1102 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 SLC8B1Q6J4K2 584 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 CREBRFQ8IUR6 639 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 ADGRF2Q8IZF7 708 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 TMEM130Q8N3G9 435 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 FAXDC2Q96IV6 333 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 MMS19Q96T76 1030 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 IGFLR1Q9H665 355 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 DZANK1Q9NVP4 752 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 CLDND1Q9NY35 253 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 COG5Q9UP83 839 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 HCFC2Q9Y5Z7 792 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 CDY1Q9Y6F8 540 aa13.06□□□□□ -0.32
SF3B3-208ENST00000567250 MYO7AQ13402 2215 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 SMTNL1A8MU46 457 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 PER2O15055 1255 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 PMM2O15305 246 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 VNN1O95497 513 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 ASS1P00966 412 aaKnown RBP13.05□□□□□ -0.32
SF3B3-208ENST00000567250 CST3P01034 146 aaPredicted RBP13.05□□□□□ -0.32
SF3B3-208ENST00000567250 FAM163BP0C2L3 166 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 CPB1P15086 417 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 IGFBP6P24592 240 aaPredicted RBP13.05□□□□□ -0.32
SF3B3-208ENST00000567250 LHX1P48742 406 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 CLCN4P51793 760 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 TPM4P67936 248 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 NOP14P78316 857 aaKnown RBP13.05□□□□□ -0.32
SF3B3-208ENST00000567250 TSPY1Q01534 308 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 MRPL58Q14197 206 aaKnown RBP13.05□□□□□ -0.32
SF3B3-208ENST00000567250 COL19A1Q14993 1142 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 MAN2A1Q16706 1144 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 WDR44Q5JSH3 913 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 LIN9Q5TKA1 542 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 EP400NLQ6ZTU2 488 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 TAS1R2Q8TE23 839 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 HLA-CQ95604 372 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 MED15Q96RN5 788 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 DNAI2Q9GZS0 605 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 XYLT2Q9H1B5 865 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 RAB20Q9NX57 234 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 FBXL5Q9UKA1 691 aa13.05□□□□□ -0.32
SF3B3-208ENST00000567250 L1RE1Q9UN81 338 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms