RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ZNF516Q92618 1163 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 FAM213AQ9BRX8 229 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 DDX23Q9BUQ8 820 aaKnown RBP17.79■□□□□ 0.44
CMTM3-213ENST00000566756 XPNPEP1Q9NQW7 623 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.79■□□□□ 0.44
CMTM3-213ENST00000566756 MORF4L1Q9UBU8 362 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 ANAPC5Q9UJX4 755 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 SCINQ9Y6U3 715 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 MCM3APO60318 1980 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 UMODL1Q5DID0 1318 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 PLXNB2O15031 1838 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 IGKV6D-21A0A0A0MT36 114 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 MGRN1O60291 552 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 ABHD2P08910 425 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 TAS1R3Q7RTX0 852 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 CCDC60Q8IWA6 550 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-213ENST00000566756 GBP7Q8N8V2 638 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-213ENST00000566756 CCHCR1Q8TD31 782 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 MAFBQ9Y5Q3 323 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-213ENST00000566756 SOCS7O14512 581 aa17.78■□□□□ 0.44
CMTM3-213ENST00000566756 ACO1P21399 889 aaKnown RBP17.78■□□□□ 0.44
CMTM3-213ENST00000566756 UBA1P22314 1058 aaKnown RBP17.78■□□□□ 0.44
CMTM3-213ENST00000566756 CHKAP35790 457 aa17.78■□□□□ 0.44
CMTM3-213ENST00000566756 PPARDQ03181 441 aa17.78■□□□□ 0.44
CMTM3-213ENST00000566756 STAT4Q14765 748 aa17.78■□□□□ 0.44
CMTM3-213ENST00000566756 LONRF1Q17RB8 773 aa17.78■□□□□ 0.44
CMTM3-213ENST00000566756 PLEKHA7Q6IQ23 1121 aa17.78■□□□□ 0.44
CMTM3-213ENST00000566756 UHMK1Q8TAS1 419 aaKnown RBP17.78■□□□□ 0.44
CMTM3-213ENST00000566756 BICD1Q96G01 975 aa17.78■□□□□ 0.44
CMTM3-213ENST00000566756 SCLT1Q96NL6 688 aa17.78■□□□□ 0.44
CMTM3-213ENST00000566756 FNBP1Q96RU3 617 aa17.78■□□□□ 0.44
CMTM3-213ENST00000566756 ELAC2Q9BQ52 826 aaKnown RBP17.78■□□□□ 0.44
CMTM3-213ENST00000566756 CYP26B1Q9NR63 512 aa17.78■□□□□ 0.44
CMTM3-213ENST00000566756 HAUS2Q9NVX0 235 aa17.78■□□□□ 0.44
CMTM3-213ENST00000566756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.78■□□□□ 0.441e-6■■■■□ 20.6
CMTM3-213ENST00000566756 TMEM120BA0PK00 339 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 O00370 1275 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 THAP12O43422 761 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 FARP2O94887 1054 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-213ENST00000566756 ACSL3O95573 720 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 ITGBL1O95965 494 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-213ENST00000566756 LDHAP00338 332 aaKnown RBP17.77■□□□□ 0.44
CMTM3-213ENST00000566756 HLA-DRAP01903 254 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 TBXAS1P24557 533 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-213ENST00000566756 RDXP35241 583 aaKnown RBP17.77■□□□□ 0.44
CMTM3-213ENST00000566756 CETN2P41208 172 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 LIG4P49917 911 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 GSCP56915 257 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-213ENST00000566756 C1QBPQ07021 282 aaKnown RBP17.77■□□□□ 0.44
CMTM3-213ENST00000566756 SNX1Q13596 522 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 SLFN12LQ6IEE8 588 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 VSTM1Q6UX27 236 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 ABRAQ8N0Z2 381 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 CKAP2Q8WWK9 683 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 CCDC77Q9BR77 488 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 PI4K2AQ9BTU6 479 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 PORCNQ9H237 461 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 SIP14410 1827 aa17.77■□□□□ 0.44
CMTM3-213ENST00000566756 NDC80O14777 642 aa17.77■□□□□ 0.43
CMTM3-213ENST00000566756 CDH16O75309 829 aa17.77■□□□□ 0.43
CMTM3-213ENST00000566756 PGK2P07205 417 aa17.77■□□□□ 0.43
CMTM3-213ENST00000566756 ADCY8P40145 1251 aa17.77■□□□□ 0.43
CMTM3-213ENST00000566756 NOMO3P69849 1222 aa17.77■□□□□ 0.43
CMTM3-213ENST00000566756 XKR3Q5GH77 459 aa17.77■□□□□ 0.43
CMTM3-213ENST00000566756 CST9Q5W186 159 aa17.77■□□□□ 0.43
CMTM3-213ENST00000566756 DRICH1Q6PGQ1 229 aaPredicted RBP17.77■□□□□ 0.43
CMTM3-213ENST00000566756 ZNF365Q70YC5 407 aa17.77■□□□□ 0.43
CMTM3-213ENST00000566756 DYDC1Q8WWB3 177 aa17.77■□□□□ 0.43
CMTM3-213ENST00000566756 CPA5Q8WXQ8 436 aa17.77■□□□□ 0.43
CMTM3-213ENST00000566756 FAM212AQ96EL1 285 aa17.77■□□□□ 0.43
CMTM3-213ENST00000566756 CCDC113Q9H0I3 377 aa17.77■□□□□ 0.43
CMTM3-213ENST00000566756 NINJ2Q9NZG7 142 aa17.77■□□□□ 0.43
CMTM3-213ENST00000566756 USP15Q9Y4E8 981 aaPredicted RBP17.77■□□□□ 0.43
CMTM3-213ENST00000566756 STRNO43815 780 aa17.76■□□□□ 0.43
CMTM3-213ENST00000566756 RALAP11233 206 aa17.76■□□□□ 0.43
CMTM3-213ENST00000566756 PIK3CAP42336 1068 aa17.76■□□□□ 0.43
CMTM3-213ENST00000566756 RIPK1Q13546 671 aa17.76■□□□□ 0.43
CMTM3-213ENST00000566756 CUL2Q13617 745 aa17.76■□□□□ 0.43
CMTM3-213ENST00000566756 WLSQ5T9L3 541 aa17.76■□□□□ 0.43
CMTM3-213ENST00000566756 TDRD10Q5VZ19 366 aaKnown RBP17.76■□□□□ 0.43
CMTM3-213ENST00000566756 METTL7BQ6UX53 244 aa17.76■□□□□ 0.43
CMTM3-213ENST00000566756 ATG4AQ8WYN0 398 aa17.76■□□□□ 0.43
CMTM3-213ENST00000566756 HERPUD2Q9BSE4 406 aa17.76■□□□□ 0.43
CMTM3-213ENST00000566756 OSBPL8Q9BZF1 889 aa17.76■□□□□ 0.43
CMTM3-213ENST00000566756 TRIM7Q9C029 511 aa17.76■□□□□ 0.43
CMTM3-213ENST00000566756 POLR3FQ9H1D9 316 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-213ENST00000566756 ZNF302Q9NR11 478 aa17.76■□□□□ 0.43
CMTM3-213ENST00000566756 TELO2Q9Y4R8 837 aa17.76■□□□□ 0.43
CMTM3-213ENST00000566756 ASB14A6NK59 587 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 SUN1O94901 812 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 SLC8A1P32418 973 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 PRKCEQ02156 737 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 STRN3Q13033 797 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 MAMLD1Q13495 774 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 PREPLQ4J6C6 727 aaPredicted RBP17.75■□□□□ 0.43
CMTM3-213ENST00000566756 ARHGEF18Q6ZSZ5 1173 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 NMRK2Q9NPI5 230 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 EURLQ9NYK6 297 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 ADAM22Q9P0K1 906 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 AGO2Q9UKV8 859 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms