RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ZNF394Q53GI3 561 aa15.07■□□□□ 0
CDH1-209ENST00000566510 WDR81Q562E7 1941 aa15.07■□□□□ 0
CDH1-209ENST00000566510 CRELD2Q6UXH1 353 aaPredicted RBP15.07■□□□□ 0
CDH1-209ENST00000566510 C15orf39Q6ZRI6 1047 aa15.07■□□□□ 0
CDH1-209ENST00000566510 VSIG1Q86XK7 387 aa15.07■□□□□ 0
CDH1-209ENST00000566510 CCDC60Q8IWA6 550 aaPredicted RBP15.07■□□□□ 0
CDH1-209ENST00000566510 ZBED8Q8IZ13 594 aa15.07■□□□□ 0
CDH1-209ENST00000566510 FEZF2Q8TBJ5 459 aa15.07■□□□□ 0
CDH1-209ENST00000566510 FAM212AQ96EL1 285 aa15.07■□□□□ 0
CDH1-209ENST00000566510 APOBEC3GQ9HC16 384 aaKnown RBP15.07■□□□□ 0
CDH1-209ENST00000566510 RNF146Q9NTX7 359 aa15.07■□□□□ 0
CDH1-209ENST00000566510 PARVAQ9NVD7 372 aa15.07■□□□□ 0
CDH1-209ENST00000566510 SCINQ9Y6U3 715 aa15.07■□□□□ 0
CDH1-209ENST00000566510 VNN1O95497 513 aa15.07■□□□□ 0
CDH1-209ENST00000566510 C4BPAP04003 597 aaKnown RBP15.07■□□□□ 0
CDH1-209ENST00000566510 PECAM1P16284 738 aaPredicted RBP15.07■□□□□ 0
CDH1-209ENST00000566510 LMNB2Q03252 620 aa15.07■□□□□ 0
CDH1-209ENST00000566510 PTP4A2Q12974 167 aa15.07■□□□□ 0
CDH1-209ENST00000566510 ZBTB41Q5SVQ8 909 aa15.07■□□□□ 0
CDH1-209ENST00000566510 TAB3Q8N5C8 712 aaPredicted RBP15.07■□□□□ 0
CDH1-209ENST00000566510 FBF1Q8TES7 1133 aa15.07■□□□□ 0
CDH1-209ENST00000566510 GMLQ99445 158 aa15.07■□□□□ 0
CDH1-209ENST00000566510 TRABDQ9H4I3 376 aa15.07■□□□□ 0
CDH1-209ENST00000566510 SLCO1B3Q9NPD5 702 aa15.07■□□□□ 0
CDH1-209ENST00000566510 LIASO43766 372 aa15.06■□□□□ 0
CDH1-209ENST00000566510 LACTBP83111 547 aaPredicted RBP15.06■□□□□ 0
CDH1-209ENST00000566510 PSMD6Q15008 389 aa15.06■□□□□ 0
CDH1-209ENST00000566510 SETDB1Q15047 1291 aa15.06■□□□□ 0
CDH1-209ENST00000566510 PKN2Q16513 984 aaKnown RBP15.06■□□□□ 0
CDH1-209ENST00000566510 DCUN1D2Q6PH85 259 aa15.06■□□□□ 0
CDH1-209ENST00000566510 MFSD7Q6UXD7 560 aa15.06■□□□□ 0
CDH1-209ENST00000566510 FAM83AQ86UY5 434 aa15.06■□□□□ 0
CDH1-209ENST00000566510 ATG4CQ96DT6 458 aa15.06■□□□□ 0
CDH1-209ENST00000566510 SMC6Q96SB8 1091 aa15.06■□□□□ 0
CDH1-209ENST00000566510 JPH1Q9HDC5 661 aaPredicted RBP15.06■□□□□ 0
CDH1-209ENST00000566510 PHTF1Q9UMS5 762 aa15.06■□□□□ 0
CDH1-209ENST00000566510 IVNS1ABPQ9Y6Y0 642 aa15.06■□□□□ 0
CDH1-209ENST00000566510 SGK1O00141 431 aa15.06■□□□□ 0
CDH1-209ENST00000566510 WNT10BO00744 389 aa15.06■□□□□ 0
CDH1-209ENST00000566510 TJP3O95049 919 aa15.06■□□□□ 0
CDH1-209ENST00000566510 ACO1P21399 889 aaKnown RBP15.06■□□□□ 0
CDH1-209ENST00000566510 CA4P22748 312 aa15.06■□□□□ 0
CDH1-209ENST00000566510 MCCD1P59942 119 aaPredicted RBP15.06■□□□□ 0
CDH1-209ENST00000566510 NOP14P78316 857 aaKnown RBP15.06■□□□□ 0
CDH1-209ENST00000566510 ATP11AP98196 1134 aa15.06■□□□□ 0
CDH1-209ENST00000566510 MTM1Q13496 603 aa15.06■□□□□ 0
CDH1-209ENST00000566510 VSIG10LQ86VR7 867 aa15.06■□□□□ 0
CDH1-209ENST00000566510 CCHCR1Q8TD31 782 aa15.06■□□□□ 0
CDH1-209ENST00000566510 MAML1Q92585 1016 aa15.06■□□□□ 0
CDH1-209ENST00000566510 MCEEQ96PE7 176 aa15.06■□□□□ 0
CDH1-209ENST00000566510 KIAA1586Q9HCI6 787 aa15.06■□□□□ 0
CDH1-209ENST00000566510 ARHGEF3Q9NR81 526 aa15.06■□□□□ 0
CDH1-209ENST00000566510 MAP3K20Q9NYL2 800 aaKnown RBP15.06■□□□□ 0
CDH1-209ENST00000566510 NUB1Q9Y5A7 615 aa15.06■□□□□ 0
CDH1-209ENST00000566510 F8VP50 259 aa15.05■□□□□ 0
CDH1-209ENST00000566510 K7ERI5 159 aa15.05■□□□□ 0
CDH1-209ENST00000566510 DIAPH2O60879 1101 aa15.05■□□□□ 0
CDH1-209ENST00000566510 PIAS1O75925 651 aa15.05■□□□□ 0
CDH1-209ENST00000566510 RPA3P35244 121 aaPredicted RBP15.05■□□□□ 0
CDH1-209ENST00000566510 PLEKHA7Q6IQ23 1121 aa15.05■□□□□ 0
CDH1-209ENST00000566510 TRIM72Q6ZMU5 477 aa15.05■□□□□ 0
CDH1-209ENST00000566510 TRABD2AQ86V40 505 aa15.05■□□□□ 0
CDH1-209ENST00000566510 ANKMY2Q8IV38 441 aa15.05■□□□□ 0
CDH1-209ENST00000566510 GRAMD1AQ96CP6 724 aa15.05■□□□□ 0
CDH1-209ENST00000566510 ERP27Q96DN0 273 aa15.05■□□□□ 0
CDH1-209ENST00000566510 TMEM121Q9BTD3 319 aa15.05■□□□□ 0
CDH1-209ENST00000566510 MSTO1Q9BUK6 570 aa15.05■□□□□ 0
CDH1-209ENST00000566510 NOP53Q9NZM5 478 aaKnown RBP15.05■□□□□ 0
CDH1-209ENST00000566510 ARHGAP28Q9P2N2 729 aa15.05■□□□□ 0
CDH1-209ENST00000566510 IP6K2Q9UHH9 426 aa15.05■□□□□ 0
CDH1-209ENST00000566510 ZNF541Q9H0D2 1346 aa15.05■□□□□ -0
CDH1-209ENST00000566510 DNALI1O14645 258 aaPredicted RBP15.05■□□□□ -0
CDH1-209ENST00000566510 BANF1O75531 89 aa15.05■□□□□ -0
CDH1-209ENST00000566510 DYNLT1P63172 113 aa15.05■□□□□ -0
CDH1-209ENST00000566510 SPARCL1Q14515 664 aa15.05■□□□□ -0
CDH1-209ENST00000566510 RNF43Q68DV7 783 aa15.05■□□□□ -0
CDH1-209ENST00000566510 SCARA3Q6AZY7 606 aa15.05■□□□□ -0
CDH1-209ENST00000566510 RCOR2Q8IZ40 523 aa15.05■□□□□ -0
CDH1-209ENST00000566510 OR5B17Q8NGF7 314 aa15.05■□□□□ -0
CDH1-209ENST00000566510 DEPTORQ8TB45 409 aa15.05■□□□□ -0
CDH1-209ENST00000566510 RBM41Q96IZ5 413 aaKnown RBP15.05■□□□□ -0
CDH1-209ENST00000566510 SLITRK1Q96PX8 696 aa15.05■□□□□ -0
CDH1-209ENST00000566510 TMEM237Q96Q45 408 aa15.05■□□□□ -0
CDH1-209ENST00000566510 TARS2Q9BW92 718 aaKnown RBP15.05■□□□□ -0
CDH1-209ENST00000566510 KIAA1683Q9H0B3 1180 aa15.05■□□□□ -0
CDH1-209ENST00000566510 MYLK2Q9H1R3 596 aa15.05■□□□□ -0
CDH1-209ENST00000566510 EBF2Q9HAK2 575 aa15.05■□□□□ -0
CDH1-209ENST00000566510 SLC9A2Q9UBY0 812 aa15.05■□□□□ -0
CDH1-209ENST00000566510 C15orf41Q9Y2V0 281 aa15.05■□□□□ -0
CDH1-209ENST00000566510 ACTL7BQ9Y614 415 aa15.05■□□□□ -0
CDH1-209ENST00000566510 A0A1B0GUA9 196 aa15.04■□□□□ -0
CDH1-209ENST00000566510 LRRD1A4D1F6 860 aa15.04■□□□□ -0
CDH1-209ENST00000566510 VWA5AO00534 786 aa15.04■□□□□ -0
CDH1-209ENST00000566510 DKC1O60832 514 aaKnown RBP eCLIP15.04■□□□□ -0
CDH1-209ENST00000566510 TARSP26639 723 aaKnown RBP15.04■□□□□ -0
CDH1-209ENST00000566510 PSMC4P43686 418 aa15.04■□□□□ -0
CDH1-209ENST00000566510 ACTR2P61160 394 aa15.04■□□□□ -0
CDH1-209ENST00000566510 PDIA2Q13087 525 aaKnown RBP15.04■□□□□ -0
CDH1-209ENST00000566510 ERICH1Q86X53 443 aa15.04■□□□□ -0
CDH1-209ENST00000566510 RDM1Q8NG50 284 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms