RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 MRGPRX4Q96LA9 322 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 SAMD11Q96NU1 681 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 CHMP4AQ9BY43 222 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 TDP1Q9NUW8 608 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 NR2E1Q9Y466 385 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 TIAM2Q8IVF5 1701 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 GOLGA6CA6NDK9 693 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 GOLGA6BA6NDN3 693 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 H0YIN7 160 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 CNOT4O95628 575 aaKnown RBP5.06□□□□□ -1.6
LINC00561-201ENST00000565815 LTA4HP09960 611 aaKnown RBP5.06□□□□□ -1.6
LINC00561-201ENST00000565815 GOLGA6DP0CG33 693 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 GUCY1A2P33402 732 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 UBE3BQ7Z3V4 1068 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 RALYLQ86SE5 291 aaKnown RBP5.06□□□□□ -1.6
LINC00561-201ENST00000565815 UNC5BQ8IZJ1 945 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 RNF169Q8NCN4 708 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 RGMAQ96B86 450 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 KCNH6Q9H252 994 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 BARX1Q9HBU1 254 aaPredicted RBP5.06□□□□□ -1.6
LINC00561-201ENST00000565815 GOLGA6AQ9NYA3 693 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 SLC45A2Q9UMX9 530 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 USP42Q9H9J4 1324 aaKnown RBP5.06□□□□□ -1.6
LINC00561-201ENST00000565815 COL5A3P25940 1745 aaPredicted RBP5.06□□□□□ -1.6
LINC00561-201ENST00000565815 NRXN2Q9P2S2 1712 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 CYP27B1O15528 508 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 MAFO75444 373 aaPredicted RBP5.06□□□□□ -1.6
LINC00561-201ENST00000565815 PRSS23O95084 383 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 RHCEP18577 417 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 RAP1GAPP47736 663 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 NRG3P56975 720 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 ATP8B2P98198 1209 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 RHDQ02161 417 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 AMOTQ4VCS5 1084 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 CCDC181Q5TID7 509 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 PPP4R4Q6NUP7 873 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 LCNL1Q6ZST4 164 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 C1QL4Q86Z23 238 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 PCSK9Q8NBP7 692 aaKnown RBP5.06□□□□□ -1.6
LINC00561-201ENST00000565815 SLC35A4Q96G79 324 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 WRNIP1Q96S55 665 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 MEGF9Q9H1U4 602 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 AS3MTQ9HBK9 375 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 SLAMF7Q9NQ25 335 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 GPRC5DQ9NZD1 345 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 PCDHA6Q9UN73 950 aa5.06□□□□□ -1.6
LINC00561-201ENST00000565815 WDR33Q9C0J8 1336 aaKnown RBP5.06□□□□□ -1.6
LINC00561-201ENST00000565815 ATRNL1Q5VV63 1379 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 NPC1L1Q9UHC9 1359 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 UBE2QL1A1L167 161 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 MROH6A6NGR9 719 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 FSBPO95073 299 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 KITP10721 976 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 NOGQ13253 232 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 ITPK1Q13572 414 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 PLS1Q14651 629 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 KIAA0753Q2KHM9 967 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 CCDC157Q569K6 752 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 OR5M3Q8NGP4 307 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 LCORQ96JN0 433 aaPredicted RBP5.05□□□□□ -1.6
LINC00561-201ENST00000565815 SARGQ9BW04 601 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 FBXO10Q9UK96 956 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 PCDHA1Q9Y5I3 950 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 ANKRD26Q9UPS8 1709 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 POLRMTO00411 1230 aaKnown RBP5.05□□□□□ -1.6
LINC00561-201ENST00000565815 NOBOXO60393 691 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 NRP2O60462 931 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 CDC14BO60729 498 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 GPR32O75388 356 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 KRT18P05783 430 aaKnown RBP5.05□□□□□ -1.6
LINC00561-201ENST00000565815 DDCP20711 480 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 SERPINB3P29508 390 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 RHBDL3P58872 404 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 MTM1Q13496 603 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 RIN1Q13671 783 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 ZNF385BQ569K4 471 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 DRC7Q8IY82 874 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.05□□□□□ -1.6
LINC00561-201ENST00000565815 NSUN6Q8TEA1 469 aaKnown RBP5.05□□□□□ -1.6
LINC00561-201ENST00000565815 ZNF480Q8WV37 535 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 NAA15Q9BXJ9 866 aaKnown RBP5.05□□□□□ -1.6
LINC00561-201ENST00000565815 CPA4Q9UI42 421 aa5.05□□□□□ -1.6
LINC00561-201ENST00000565815 TCRBV7S2A1N4TA0A589 114 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 PRICKLE3O43900 615 aaPredicted RBP5.04□□□□□ -1.6
LINC00561-201ENST00000565815 TUSC2O75896 110 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 RAP2AP10114 183 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 PHKG2P15735 406 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 ALOX15P16050 662 aaPredicted RBP5.04□□□□□ -1.6
LINC00561-201ENST00000565815 BMP7P18075 431 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 AKAP5P24588 427 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 DUSP2Q05923 314 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 PLEKHO1Q53GL0 409 aaPredicted RBP5.04□□□□□ -1.6
LINC00561-201ENST00000565815 KLHDC4Q8TBB5 520 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 CPEB1Q9BZB8 566 aaKnown RBP5.04□□□□□ -1.6
LINC00561-201ENST00000565815 C22orf23Q9BZE7 217 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 SENP6Q9GZR1 1112 aaPredicted RBP5.04□□□□□ -1.6
LINC00561-201ENST00000565815 IL23AQ9NPF7 189 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 HACL1Q9UJ83 578 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 CHGBP05060 677 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 SNAPC2Q13487 334 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms