RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 OBP2BQ9NPH6 170 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 INTS7Q9NVH2 962 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 ACTR3BQ9P1U1 418 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 OGDHLQ9ULD0 1010 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 PCDHB5Q9Y5E4 795 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 PI4KAP2A4QPH2 592 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 LRRIQ4A6NIV6 560 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 AQP12BA6NM10 295 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 GPR89AB7ZAQ6 455 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 H0Y626 953 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 EREGO14944 169 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 KINO60870 393 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 GPR89BP0CG08 455 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 JUPP14923 745 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 CDH3P22223 829 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 PTGS2P35354 604 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 PRKCIP41743 596 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 LMAN1P49257 510 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 ATXN3P54252 364 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 NR1H2P55055 460 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 SGCGQ13326 291 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 LRP8Q14114 963 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 CLEC16AQ2KHT3 1053 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 SHROOM1Q2M3G4 852 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 ZNF805Q5CZA5 627 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 JMJD6Q6NYC1 403 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 KLC3Q6P597 504 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 REC114Q7Z4M0 266 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 SRGAP1Q7Z6B7 1085 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 C1orf162Q8NEQ5 155 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 PHKBQ93100 1093 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 SMARCE1Q969G3 411 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 LRRC46Q96FV0 321 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 ZNF333Q96JL9 665 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 TTC25Q96NG3 672 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 AARSD1Q9BTE6 412 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 STK31Q9BXU1 1019 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 STMN4Q9H169 189 aaPredicted RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 GHITMQ9H3K2 345 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 IGFLR1Q9H665 355 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 LATS2Q9NRM7 1088 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 PPARGC1AQ9UBK2 798 aaKnown RBP3.29□□□□□ -1.88
CHD9-216ENST00000565803 MALT1Q9UDY8 824 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 FPGT-TNNI3KV9GXZ4 949 aa3.29□□□□□ -1.88
CHD9-216ENST00000565803 MGAMO43451 1857 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 LRRC37A2A6NM11 1700 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 A0A1B0GVC2 190 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 CAPN14A8MX76 684 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 PLOD2O00469 737 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 YEATS4O95619 227 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 KRT1P04264 644 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 SNRNP70P08621 437 aaKnown RBP3.28□□□□□ -1.88
CHD9-216ENST00000565803 ACADMP11310 421 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 IMPDH2P12268 514 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 KELP23276 732 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 HOXD10P28358 340 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 IGFALSP35858 605 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 CYP4F8P98187 520 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 TYRO3Q06418 890 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 DHCR24Q15392 516 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 LRRFIP1Q32MZ4 808 aaKnown RBP3.28□□□□□ -1.88
CHD9-216ENST00000565803 MCTP2Q6DN12 878 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ABRAXAS1Q6UWZ7 409 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ATF7IPQ6VMQ6 1270 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 TMTC1Q8IUR5 882 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 NKAIN3Q8N8D7 197 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 Q8NFD4 153 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ARL8AQ96BM9 186 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 CDCA5Q96FF9 252 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 PPP1R13BQ96KQ4 1090 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 C1orf74Q96LT6 269 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 KCNC2Q96PR1 638 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 RUFY1Q96T51 708 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 PKP4Q99569 1192 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 GDF15Q99988 308 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 TTPALQ9BTX7 342 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 CARD11Q9BXL7 1154 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 FOXP3Q9BZS1 431 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 PAIP1Q9H074 479 aaKnown RBP3.28□□□□□ -1.88
CHD9-216ENST00000565803 ELP3Q9H9T3 547 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 CRLF2Q9HC73 371 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 EMC7Q9NPA0 242 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 SNTG1Q9NSN8 517 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 SPTLC3Q9NUV7 552 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 DNAJC28Q9NX36 388 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 TBC1D7Q9P0N9 293 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ANGPTL2Q9UKU9 493 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 SNX8Q9Y5X2 465 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 COL11A1P12107 1806 aaPredicted RBP3.28□□□□□ -1.88
CHD9-216ENST00000565803 PCDH11XQ9BZA7 1347 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 PCDH11YQ9BZA8 1340 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 EDC4Q6P2E9 1401 aaKnown RBP3.28□□□□□ -1.88
CHD9-216ENST00000565803 CCDC169A6NNP5 214 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 LGALS16A8MUM7 142 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 TMEM229AB2RXF0 380 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 CRTAMO95727 393 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ZBED1O96006 694 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ADH1CP00326 375 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 CKBP12277 381 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 CHMP24386 653 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms