RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 CCR2P41597 374 aa21.5■■□□□ 1.03
CLN6-206ENST00000565471 TAF6P49848 677 aa21.5■■□□□ 1.03
CLN6-206ENST00000565471 ANGPT1Q15389 498 aa21.5■■□□□ 1.03
CLN6-206ENST00000565471 MLF2Q15773 248 aaPredicted RBP21.5■■□□□ 1.03
CLN6-206ENST00000565471 CENPPQ6IPU0 288 aa21.5■■□□□ 1.03
CLN6-206ENST00000565471 EFCAB13Q8IY85 973 aa21.5■■□□□ 1.03
CLN6-206ENST00000565471 HS6ST3Q8IZP7 471 aa21.5■■□□□ 1.03
CLN6-206ENST00000565471 PDILTQ8N807 584 aa21.5■■□□□ 1.03
CLN6-206ENST00000565471 PGLYRP2Q96PD5 576 aa21.5■■□□□ 1.03
CLN6-206ENST00000565471 DDX23Q9BUQ8 820 aaKnown RBP21.5■■□□□ 1.03
CLN6-206ENST00000565471 LRRC27Q9C0I9 530 aa21.5■■□□□ 1.03
CLN6-206ENST00000565471 TNMDQ9H2S6 317 aa21.5■■□□□ 1.03
CLN6-206ENST00000565471 CUEDC2Q9H467 287 aa21.5■■□□□ 1.03
CLN6-206ENST00000565471 DLGAP2Q9P1A6 1054 aa21.5■■□□□ 1.03
CLN6-206ENST00000565471 SCN1AP35498 2009 aa21.5■■□□□ 1.03
CLN6-206ENST00000565471 MTMR11A4FU01 709 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 GFRA3O60609 400 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 MOSPD3O75425 235 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 LDHAP00338 332 aaKnown RBP21.49■■□□□ 1.03
CLN6-206ENST00000565471 FCARP24071 287 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 DUSP4Q13115 394 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 SNW1Q13573 536 aaKnown RBP21.49■■□□□ 1.03
CLN6-206ENST00000565471 SLC44A4Q53GD3 710 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 TANGO2Q6ICL3 276 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 ARMCX5Q6P1M9 558 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 HSCBQ8IWL3 235 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 BRSK2Q8IWQ3 736 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 CCDC65Q8IXS2 484 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 SYCP3Q8IZU3 236 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 PJA1Q8NG27 643 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 ASB16Q96NS5 453 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 FAM213AQ9BRX8 229 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 CRISPLD1Q9H336 500 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 TMEM206Q9H813 350 aa21.49■■□□□ 1.03
CLN6-206ENST00000565471 TFIP11Q9UBB9 837 aaKnown RBP21.49■■□□□ 1.03
CLN6-206ENST00000565471 KANSL1LA0AUZ9 987 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 MYL4P12829 197 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 ALDH1A3P47895 512 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 EPHB3P54753 998 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 E2F4Q16254 413 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 FAM78AQ5JUQ0 283 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 METTL23Q86XA0 190 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 OR10T2Q8NGX3 314 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 ZNF560Q96MR9 790 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 FGFBP2Q9BYJ0 223 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 PLA2G2FQ9BZM2 168 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 FOXQ1Q9C009 403 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 DNAJC25Q9H1X3 360 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 ZFP14Q9HCL3 533 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 KBTBD4Q9NVX7 518 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 ASB3Q9Y575 518 aa21.48■■□□□ 1.03
CLN6-206ENST00000565471 CYB561D2O14569 222 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 CUTAO60888 179 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 PNPLA4P41247 253 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 SV2CQ496J9 727 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 STXBP4Q6ZWJ1 553 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 ATAD1Q8NBU5 361 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 DNASE1L2Q92874 299 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 SMARCD2Q92925 531 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 SAAL1Q96ER3 474 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 BORCS6Q96GS4 357 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 TMEM209Q96SK2 561 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 PYM1Q9BRP8 204 aaKnown RBP21.47■■□□□ 1.03
CLN6-206ENST00000565471 LRRC3Q9BY71 257 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 OSBPL6Q9BZF3 934 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 GPR88Q9GZN0 384 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 ZCWPW1Q9H0M4 648 aa21.47■■□□□ 1.03
CLN6-206ENST00000565471 NRG2O14511 850 aaPredicted RBP21.46■■□□□ 1.03
CLN6-206ENST00000565471 KIAA0391O15091 583 aaKnown RBP21.46■■□□□ 1.03
CLN6-206ENST00000565471 DCNP07585 359 aaKnown RBP21.46■■□□□ 1.03
CLN6-206ENST00000565471 TMC8Q8IU68 726 aa21.46■■□□□ 1.03
CLN6-206ENST00000565471 THEM5Q8N1Q8 247 aa21.46■■□□□ 1.03
CLN6-206ENST00000565471 ZSWIM2Q8NEG5 633 aa21.46■■□□□ 1.03
CLN6-206ENST00000565471 ZSWIM3Q96MP5 696 aa21.46■■□□□ 1.03
CLN6-206ENST00000565471 CBWD1Q9BRT8 395 aa21.46■■□□□ 1.03
CLN6-206ENST00000565471 TRIM9Q9C026 710 aa21.46■■□□□ 1.03
CLN6-206ENST00000565471 TRPV4Q9HBA0 871 aa21.46■■□□□ 1.03
CLN6-206ENST00000565471 RBAKQ9NYW8 714 aaPredicted RBP21.46■■□□□ 1.03
CLN6-206ENST00000565471 SLC27A5Q9Y2P5 690 aa21.46■■□□□ 1.03
CLN6-206ENST00000565471 TCHHQ07283 1943 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 KPNA7A9QM74 516 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 EXTL3O43909 919 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 PRPF6O94906 941 aaKnown RBP21.45■■□□□ 1.02
CLN6-206ENST00000565471 HSP90AA1P07900 732 aaKnown RBP21.45■■□□□ 1.02
CLN6-206ENST00000565471 ZSCAN22P10073 491 aaPredicted RBP21.45■■□□□ 1.02
CLN6-206ENST00000565471 WNT7BP56706 349 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 TFAMQ00059 246 aaKnown RBP21.45■■□□□ 1.02
CLN6-206ENST00000565471 AMPD3Q01432 767 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 SMARCB1Q12824 385 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 TEAD2Q15562 447 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 CNNM4Q6P4Q7 775 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 SHC4Q6S5L8 630 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 FRMD5Q7Z6J6 570 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 IQUBQ8NA54 791 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 SHKBP1Q8TBC3 707 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 C2orf15Q8WU43 125 aaKnown RBP21.45■■□□□ 1.02
CLN6-206ENST00000565471 CACTINQ8WUQ7 758 aaKnown RBP21.45■■□□□ 1.02
CLN6-206ENST00000565471 PSMG2Q969U7 264 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 MIA3Q5JRA6 1907 aa21.45■■□□□ 1.02
CLN6-206ENST00000565471 PRR23AA6NEV1 266 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms