RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CEBPBP17676 345 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 PSMC3P17980 439 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 RPS9P46781 194 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 ACOT2P49753 483 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 DUSP4Q13115 394 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 ZC2HC1CQ53FD0 456 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 FAM78AQ5JUQ0 283 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 C1orf228Q6PIY5 440 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 MAMSTRQ6ZN01 415 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 USP49Q70CQ1 688 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 DYMQ7RTS9 669 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 ITIH5Q86UX2 942 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 THEM5Q8N1Q8 247 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 ST13P5Q8NFI4 369 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 CACTINQ8WUQ7 758 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 POMGNT1Q8WZA1 660 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 CLDN23Q96B33 292 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 DNAJC19Q96DA6 116 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 TCEAL4Q96EI5 215 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 FOXQ1Q9C009 403 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 LRRC27Q9C0I9 530 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 OLFML3Q9NRN5 406 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 DPP3Q9NY33 737 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 FBXO4Q9UKT5 387 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 YIPF1Q9Y548 306 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 TIMM13Q9Y5L4 95 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 MYH15Q9Y2K3 1946 aa13.19□□□□□ -0.3
GTF3C1-204ENST00000564664 MYMKA6NI61 221 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 KIAA0391O15091 583 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 LMNAP02545 664 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 SP9P0CG40 484 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 GARTP22102 1010 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 FCARP24071 287 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 WEE1P30291 646 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 PNPLA4P41247 253 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 CCR2P41597 374 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 TAF6P49848 677 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 SFR1Q86XK3 245 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 MFSD6LQ8IWD5 586 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 HS6ST3Q8IZP7 471 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 IER2Q9BTL4 223 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 BACH2Q9BYV9 841 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 PLA2G2FQ9BZM2 168 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 TMEM206Q9H813 350 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 BRD9Q9H8M2 597 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 LTB4R2Q9NPC1 389 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 ZMYM5Q9UJ78 669 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 CACNA1IQ9P0X4 2223 aa13.18□□□□□ -0.3
GTF3C1-204ENST00000564664 FRMD3A2A2Y4 597 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 CYB561D2O14569 222 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 LAMTOR5O43504 91 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 STX6O43752 255 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 MOSPD3O75425 235 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 VNN2O95498 520 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 NFICP08651 508 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 MYL4P12829 197 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 ADSSP30520 456 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 STAT6P42226 847 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 NASPP49321 788 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 GUCY2FP51841 1108 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 UBXN2BQ14CS0 331 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 POTEHQ6S545 545 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 CRELD2Q6UXH1 353 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 STXBP4Q6ZWJ1 553 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 DNAJB7Q7Z6W7 309 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 ADSSL1Q8N142 457 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 ZSCAN18Q8TBC5 510 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 PSMG2Q969U7 264 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 MSANTD3Q96H12 275 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 CLIC6Q96NY7 704 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 PGLYRP2Q96PD5 576 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 LRRC3Q9BY71 257 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 ZCWPW1Q9H0M4 648 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 ZNF334Q9HCZ1 680 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 MTMR6Q9Y217 621 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 MYO15AQ9UKN7 3530 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 F5P12259 2224 aa13.17□□□□□ -0.3
GTF3C1-204ENST00000564664 MTMR11A4FU01 709 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 KPNA7A9QM74 516 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 K7ELQ4 463 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 PPEF2O14830 753 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 ZNF263O14978 683 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 SPTLC1O15269 473 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 PPP6R2O75170 966 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 OR4Q2P0C623 313 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 AMPD3Q01432 767 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 CEBPZQ03701 1054 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 SV2CQ496J9 727 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 TPRG1Q6ZUI0 275 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 CCDC65Q8IXS2 484 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 DCP1BQ8IZD4 617 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 SYCP3Q8IZU3 236 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 ATAD1Q8NBU5 361 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 SHKBP1Q8TBC3 707 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 SPATA18Q8TC71 538 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 SPPL2BQ8TCT7 592 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 KCNG4Q8TDN1 519 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 ZSWIM3Q96MP5 696 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms