RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 FRMD5Q7Z6J6 570 aa16.24■□□□□ 0.19
SPG7-210ENST00000564409 METTL23Q86XA0 190 aa16.24■□□□□ 0.19
SPG7-210ENST00000564409 C1orf210Q8IVY1 113 aa16.24■□□□□ 0.19
SPG7-210ENST00000564409 SMARCD2Q92925 531 aa16.24■□□□□ 0.19
SPG7-210ENST00000564409 ASB16Q96NS5 453 aa16.24■□□□□ 0.19
SPG7-210ENST00000564409 CLIC6Q96NY7 704 aa16.24■□□□□ 0.19
SPG7-210ENST00000564409 BCO2Q9BYV7 579 aa16.24■□□□□ 0.19
SPG7-210ENST00000564409 LRRC27Q9C0I9 530 aa16.24■□□□□ 0.19
SPG7-210ENST00000564409 TRPV5Q9NQA5 729 aa16.24■□□□□ 0.19
SPG7-210ENST00000564409 DPP3Q9NY33 737 aa16.24■□□□□ 0.19
SPG7-210ENST00000564409 YIPF1Q9Y548 306 aa16.24■□□□□ 0.19
SPG7-210ENST00000564409 TIMM13Q9Y5L4 95 aaPredicted RBP16.24■□□□□ 0.19
SPG7-210ENST00000564409 DCNP07585 359 aaKnown RBP16.23■□□□□ 0.19
SPG7-210ENST00000564409 GARTP22102 1010 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 PNPLA4P41247 253 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 NASPP49321 788 aaPredicted RBP16.23■□□□□ 0.19
SPG7-210ENST00000564409 TUFMP49411 452 aaKnown RBP16.23■□□□□ 0.19
SPG7-210ENST00000564409 TAF6P49848 677 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 GUCY2FP51841 1108 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 FAM78AQ5JUQ0 283 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 TANGO2Q6ICL3 276 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 CENPPQ6IPU0 288 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 ITIH5Q86UX2 942 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 ST13P5Q8NFI4 369 aaPredicted RBP16.23■□□□□ 0.19
SPG7-210ENST00000564409 C2orf15Q8WU43 125 aaKnown RBP16.23■□□□□ 0.19
SPG7-210ENST00000564409 DEPDC1BQ8WUY9 529 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 IRF7Q92985 503 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 TCEAL4Q96EI5 215 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 USP28Q96RU2 1077 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 TRMT61BQ9BVS5 477 aaKnown RBP16.23■□□□□ 0.19
SPG7-210ENST00000564409 TSC2P49815 1807 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 F5P12259 2224 aa16.23■□□□□ 0.19
SPG7-210ENST00000564409 FRMD3A2A2Y4 597 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 KIAA0391O15091 583 aaKnown RBP16.22■□□□□ 0.19
SPG7-210ENST00000564409 VNN2O95498 520 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 MYL4P12829 197 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 PSMC3P17980 439 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 FCARP24071 287 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 ADSSP30520 456 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 CCR2P41597 374 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 CEBPZQ03701 1054 aaKnown RBP16.22■□□□□ 0.19
SPG7-210ENST00000564409 DUSP4Q13115 394 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 SV2CQ496J9 727 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 FAM173BQ6P4H8 233 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 CRELD2Q6UXH1 353 aaPredicted RBP16.22■□□□□ 0.19
SPG7-210ENST00000564409 ZNF852Q6ZMS4 543 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 STXBP4Q6ZWJ1 553 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 ASCL5Q7RTU5 278 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 THEM5Q8N1Q8 247 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 CACTINQ8WUQ7 758 aaKnown RBP16.22■□□□□ 0.19
SPG7-210ENST00000564409 ZNF560Q96MR9 790 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 ZNF396Q96N95 335 aaPredicted RBP16.22■□□□□ 0.19
SPG7-210ENST00000564409 FOXQ1Q9C009 403 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 CUEDC2Q9H467 287 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 TMEM206Q9H813 350 aa16.22■□□□□ 0.19
SPG7-210ENST00000564409 MTMR11A4FU01 709 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 FAM170BA6NMN3 283 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 MAN2B1O00754 1011 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 PPEF2O14830 753 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 SPTLC1O15269 473 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 PPP6R2O75170 966 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 GCNT3O95395 438 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 IDEP14735 1019 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 GLULP15104 373 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 RPS9P46781 194 aaKnown RBP16.21■□□□□ 0.19
SPG7-210ENST00000564409 MLLT6P55198 1093 aaPredicted RBP16.21■□□□□ 0.19
SPG7-210ENST00000564409 UBXN2BQ14CS0 331 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 STK38Q15208 465 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 ZNF528Q3MIS6 628 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 CCDC65Q8IXS2 484 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 HS6ST3Q8IZP7 471 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 SYCP3Q8IZU3 236 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 SNX21Q969T3 373 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 PSMG2Q969U7 264 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 CLDN23Q96B33 292 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 PGLYRP2Q96PD5 576 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 PLA2G2FQ9BZM2 168 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 BRD9Q9H8M2 597 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 LTB4R2Q9NPC1 389 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 PANK4Q9NVE7 773 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 ZMYM5Q9UJ78 669 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 FBXO4Q9UKT5 387 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 USP34Q70CQ2 3546 aa16.21■□□□□ 0.19
SPG7-210ENST00000564409 PATJQ8NI35 1801 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 KPNA7A9QM74 516 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 TISP43B9A030 160 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 CYB561D2O14569 222 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 MOSPD3O75425 235 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 OR4Q2P0C623 313 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 AMPD3Q01432 767 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 C1orf228Q6PIY5 440 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 TPRG1Q6ZUI0 275 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 MFSD6LQ8IWD5 586 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 BRSK2Q8IWQ3 736 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 TMEM130Q8N3G9 435 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 LINC00301Q8NCQ3 95 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 SHKBP1Q8TBC3 707 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 ZSCAN18Q8TBC5 510 aaPredicted RBP16.2■□□□□ 0.18
SPG7-210ENST00000564409 PYM1Q9BRP8 204 aaKnown RBP16.2■□□□□ 0.18
SPG7-210ENST00000564409 IER2Q9BTL4 223 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms