RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 BANF1O75531 89 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 PSMG1O95456 288 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 FAM200BP0CF97 657 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 BMP3P12645 472 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 GNAZP19086 355 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 SMAD1Q15797 465 aaKnown RBP13.43□□□□□ -0.26
CCDC187-201ENST00000563590 TBC1D25Q3MII6 688 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 LRRC6Q86X45 466 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 PASD1Q8IV76 773 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 RIBC1Q8N443 379 aaPredicted RBP13.43□□□□□ -0.26
CCDC187-201ENST00000563590 RAB3IL1Q8TBN0 382 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 PRPF31Q8WWY3 499 aaKnown RBP13.43□□□□□ -0.26
CCDC187-201ENST00000563590 A6NJR5 290 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 DNAJC6O75061 913 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 ZSCAN5DPP0CG00 497 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 ITIH2P19823 946 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 HOXA10P31260 410 aaPredicted RBP13.43□□□□□ -0.26
CCDC187-201ENST00000563590 GPS1Q13098 491 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 ACBD5Q5T8D3 534 aaPredicted RBP13.43□□□□□ -0.26
CCDC187-201ENST00000563590 MTHFD1LQ6UB35 978 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 C4orf50Q6ZRC1 276 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 PODNQ7Z5L7 613 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 KLHL23Q8NBE8 558 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC187-201ENST00000563590 RFWD2Q8NHY2 731 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 ACSF2Q96CM8 615 aaPredicted RBP13.43□□□□□ -0.26
CCDC187-201ENST00000563590 MPP4Q96JB8 637 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 ZNF184Q99676 751 aaPredicted RBP13.43□□□□□ -0.26
CCDC187-201ENST00000563590 OCEL1Q9H607 264 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 GSTA2P09210 222 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 CCNB1P14635 433 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 USP46P62068 366 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 PDIA2Q13087 525 aaKnown RBP13.43□□□□□ -0.26
CCDC187-201ENST00000563590 SLC1A5Q15758 541 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 OTOAQ7RTW8 1153 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 GRK7Q8WTQ7 553 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 WDR60Q8WVS4 1066 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 TRAIPQ9BWF2 469 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 CADM1Q9BY67 442 aaKnown RBP13.43□□□□□ -0.26
CCDC187-201ENST00000563590 GINM1Q9NU53 330 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 GPR75-ASB3A0A0A6YYF3 556 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 SGK1O00141 431 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 RALAP11233 206 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 DESP17661 470 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 CHRNB2P17787 502 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 RRM1P23921 792 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 ALDH18A1P54886 795 aaKnown RBP13.42□□□□□ -0.26
CCDC187-201ENST00000563590 SPIRE1Q08AE8 756 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 PDE1CQ14123 709 aaPredicted RBP13.42□□□□□ -0.26
CCDC187-201ENST00000563590 LBRQ14739 615 aaKnown RBP13.42□□□□□ -0.26
CCDC187-201ENST00000563590 PARP6Q2NL67 630 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 BBS9Q3SYG4 887 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 LLGL2Q6P1M3 1020 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 CYFIP1Q7L576 1253 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 PALM2Q8IXS6 379 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 NSL1Q96IY1 281 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 PRMT6Q96LA8 375 aaPredicted RBP13.42□□□□□ -0.26
CCDC187-201ENST00000563590 ZNF577Q9BSK1 485 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 WNT8AQ9H1J5 351 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 ETNK2Q9NVF9 386 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 ANKFY1Q9P2R3 1169 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 SMAPO00193 183 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 RHBDL3P58872 404 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 STAT4Q14765 748 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 ZNF394Q53GI3 561 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 TUBGCP5Q96RT8 1024 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 GPRC5CQ9NQ84 441 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 AMPD1P23109 780 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 ATXN3P54252 364 aaPredicted RBP13.42□□□□□ -0.26
CCDC187-201ENST00000563590 BMT2Q1RMZ1 405 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 C11orf63Q6NUN7 778 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 TTC7BQ86TV6 843 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 MYLK4Q86YV6 388 aaPredicted RBP13.42□□□□□ -0.26
CCDC187-201ENST00000563590 ZNF75CPQ92670 426 aaPredicted RBP13.42□□□□□ -0.26
CCDC187-201ENST00000563590 BTBD10Q9BSF8 475 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 PDP2Q9P2J9 529 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 NEU2Q9Y3R4 380 aa13.42□□□□□ -0.26
CCDC187-201ENST00000563590 TP73O15350 636 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 ATP6V1G1O75348 118 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 SNHG28P0DPA3 235 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 RPA1P27694 616 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 RTP1P59025 263 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 SIX1Q15475 284 aaPredicted RBP13.41□□□□□ -0.26
CCDC187-201ENST00000563590 CNPY1Q3B7I2 92 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 PCNX4Q63HM2 1172 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 STXBP4Q6ZWJ1 553 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 PHF12Q96QT6 1004 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 TSSK1BQ9BXA7 367 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 TMEM39BQ9GZU3 492 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 TMEM117Q9H0C3 514 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 PIM2Q9P1W9 311 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 LNPEPQ9UIQ6 1025 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 FRMPD4Q14CM0 1322 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 IRS2Q9Y4H2 1338 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 ZMYM2Q9UBW7 1377 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 MEI4A8MW99 385 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 ZWINTO95229 277 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 CCNG1P51959 295 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 SYDE2Q5VT97 1194 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 CLNKQ7Z7G1 428 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms