RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 GINS2Q9Y248 185 aa20.33■□□□□ 0.85
SMPD3-203ENST00000563226 A6NJR5 290 aa20.33■□□□□ 0.84
SMPD3-203ENST00000563226 ERLIN2O94905 339 aa20.33■□□□□ 0.84
SMPD3-203ENST00000563226 RARAP10276 462 aa20.33■□□□□ 0.84
SMPD3-203ENST00000563226 CYP2C19P33261 490 aa20.33■□□□□ 0.84
SMPD3-203ENST00000563226 FLT3P36888 993 aa20.33■□□□□ 0.84
SMPD3-203ENST00000563226 PTGIRP43119 386 aa20.33■□□□□ 0.84
SMPD3-203ENST00000563226 ZNF157P51786 506 aaPredicted RBP20.33■□□□□ 0.84
SMPD3-203ENST00000563226 HIC1Q14526 733 aa20.33■□□□□ 0.84
SMPD3-203ENST00000563226 TAF1CQ15572 869 aaPredicted RBP20.33■□□□□ 0.84
SMPD3-203ENST00000563226 ZNF667Q5HYK9 610 aa20.33■□□□□ 0.84
SMPD3-203ENST00000563226 HERPUD2Q9BSE4 406 aa20.33■□□□□ 0.84
SMPD3-203ENST00000563226 BCO2Q9BYV7 579 aa20.33■□□□□ 0.84
SMPD3-203ENST00000563226 CXCL16Q9H2A7 254 aa20.33■□□□□ 0.84
SMPD3-203ENST00000563226 CDHR5Q9HBB8 845 aa20.33■□□□□ 0.84
SMPD3-203ENST00000563226 UTP11Q9Y3A2 253 aaKnown RBP20.33■□□□□ 0.84
SMPD3-203ENST00000563226 CENPFP49454 3210 aa20.33■□□□□ 0.84
SMPD3-203ENST00000563226 TRIP12Q14669 1992 aaPredicted RBP20.32■□□□□ 0.84
SMPD3-203ENST00000563226 A0A1B0GUA9 196 aa20.32■□□□□ 0.84
SMPD3-203ENST00000563226 ZNF865P0CJ78 1059 aaPredicted RBP20.32■□□□□ 0.84
SMPD3-203ENST00000563226 SMIM10L2AP0DMW4 78 aa20.32■□□□□ 0.84
SMPD3-203ENST00000563226 SMIM10L2BP0DMW5 78 aa20.32■□□□□ 0.84
SMPD3-203ENST00000563226 HSPA6P17066 643 aa20.32■□□□□ 0.84
SMPD3-203ENST00000563226 RPL7AP62424 266 aaKnown RBP20.32■□□□□ 0.84
SMPD3-203ENST00000563226 JAMLQ86YT9 394 aa20.32■□□□□ 0.84
SMPD3-203ENST00000563226 UBE2Q2Q8WVN8 375 aa20.32■□□□□ 0.84
SMPD3-203ENST00000563226 MAGOHBQ96A72 148 aaKnown RBP20.32■□□□□ 0.84
SMPD3-203ENST00000563226 DDX27Q96GQ7 796 aaKnown RBP20.32■□□□□ 0.84
SMPD3-203ENST00000563226 SH3GL2Q99962 352 aa20.32■□□□□ 0.84
SMPD3-203ENST00000563226 ADAMTS10Q9H324 1103 aa20.32■□□□□ 0.84
SMPD3-203ENST00000563226 SLC5A4Q9NY91 659 aa20.32■□□□□ 0.84
SMPD3-203ENST00000563226 HMGXB4Q9UGU5 601 aa20.32■□□□□ 0.84
SMPD3-203ENST00000563226 TLR3O15455 904 aaKnown RBP20.31■□□□□ 0.84
SMPD3-203ENST00000563226 HSF2BPO75031 334 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 F2P00734 622 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 HSPA9P38646 679 aaKnown RBP20.31■□□□□ 0.84
SMPD3-203ENST00000563226 SLC1A1P43005 524 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 TAS2R40P59535 323 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 PPP2R5EQ16537 467 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 TLK2Q86UE8 772 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 ZNF410Q86VK4 478 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 TWNKQ96RR1 684 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 ASB7Q9H672 318 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 FAM204AQ9H8W3 233 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 MRPL47Q9HD33 250 aaKnown RBP20.31■□□□□ 0.84
SMPD3-203ENST00000563226 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.31■□□□□ 0.84
SMPD3-203ENST00000563226 SCINQ9Y6U3 715 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 LSM8O95777 96 aaKnown RBP20.31■□□□□ 0.84
SMPD3-203ENST00000563226 POLR2BP30876 1174 aaKnown RBP20.31■□□□□ 0.84
SMPD3-203ENST00000563226 DHX34Q14147 1143 aaKnown RBP20.31■□□□□ 0.84
SMPD3-203ENST00000563226 TMEM132DQ14C87 1099 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 ALS2CLQ60I27 953 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 DUPD1Q68J44 220 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 DENND1BQ6P3S1 775 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 RUFY4Q6ZNE9 571 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 ZNF771Q7L3S4 317 aaPredicted RBP20.31■□□□□ 0.84
SMPD3-203ENST00000563226 IQCKQ8N0W5 287 aa20.31■□□□□ 0.84
SMPD3-203ENST00000563226 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.31■□□□□ 0.84
SMPD3-203ENST00000563226 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.31■□□□□ 0.84
SMPD3-203ENST00000563226 TCRBV5S1A1TA0A578 114 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 CYP2B6P20813 491 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 CHRNA3P32297 505 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 RAD23BP54727 409 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 CYP1B1Q16678 543 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 TMEM35BQ8NCS4 154 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 FEZF2Q8TBJ5 459 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 ERP44Q9BS26 406 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 PARVAQ9NVD7 372 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 PCYOX1Q9UHG3 505 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 PCDHGC3Q9UN70 934 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 USTQ9Y2C2 406 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 FAM187AA6NFU0 413 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 RRN3P2A6NIE6 340 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 GPR32O75388 356 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 CD19P15391 556 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 HOXA11P31270 313 aaPredicted RBP20.3■□□□□ 0.84
SMPD3-203ENST00000563226 LACTBP83111 547 aaPredicted RBP20.3■□□□□ 0.84
SMPD3-203ENST00000563226 ZNF252P-AS1Q0IIN9 211 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 CFAP58Q5T655 872 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 CYP4A22Q5TCH4 519 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 CCDC137Q6PK04 289 aaKnown RBP20.3■□□□□ 0.84
SMPD3-203ENST00000563226 USP6NLQ92738 828 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 ACAP3Q96P50 834 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 RAB17Q9H0T7 212 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 FAM114A2Q9NRY5 505 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 CYTH4Q9UIA0 394 aa20.3■□□□□ 0.84
SMPD3-203ENST00000563226 FSCN2O14926 492 aa20.29■□□□□ 0.84
SMPD3-203ENST00000563226 NPTXRO95502 500 aa20.29■□□□□ 0.84
SMPD3-203ENST00000563226 CDH5P33151 784 aaPredicted RBP20.29■□□□□ 0.84
SMPD3-203ENST00000563226 KCNJ1P48048 391 aa20.29■□□□□ 0.84
SMPD3-203ENST00000563226 YWHAEP62258 255 aaKnown RBP20.29■□□□□ 0.84
SMPD3-203ENST00000563226 UAP1Q16222 522 aaPredicted RBP20.29■□□□□ 0.84
SMPD3-203ENST00000563226 PPP1R2P3Q6NXS1 205 aa20.29■□□□□ 0.84
SMPD3-203ENST00000563226 ARL8AQ96BM9 186 aa20.29■□□□□ 0.84
SMPD3-203ENST00000563226 OSMRQ99650 979 aa20.29■□□□□ 0.84
SMPD3-203ENST00000563226 ELOVL4Q9GZR5 314 aa20.29■□□□□ 0.84
SMPD3-203ENST00000563226 TJP2Q9UDY2 1190 aa20.29■□□□□ 0.84
SMPD3-203ENST00000563226 AGAP1Q9UPQ3 857 aa20.29■□□□□ 0.84
SMPD3-203ENST00000563226 RALGAPA2Q2PPJ7 1873 aa20.29■□□□□ 0.84
SMPD3-203ENST00000563226 CALB1P05937 261 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms