RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 APOBEC3GQ9HC16 384 aaKnown RBP13.85□□□□□ -0.19
USB1-207ENST00000563149 RBAKQ9NYW8 714 aaPredicted RBP13.85□□□□□ -0.19
USB1-207ENST00000563149 SIP14410 1827 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 EXOC1LA0A1B0GW35 172 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 TMEM191CA6NGB0 347 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 ATP2A1O14983 1001 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 ASMTLO95671 621 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 LSM8O95777 96 aaKnown RBP13.84□□□□□ -0.19
USB1-207ENST00000563149 TMEM191BP0C7N4 346 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 SUPT20HL2P0C7V6 817 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 CD58P19256 250 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 MMP8P22894 467 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 CCND1P24385 295 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 HSPA1LP34931 641 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 ZNF132P52740 706 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 GRM1Q13255 1194 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 MKRN4PQ13434 485 aaPredicted RBP13.84□□□□□ -0.19
USB1-207ENST00000563149 EMC2Q15006 297 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 GNPTABQ3T906 1256 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 SUPT20HL1Q3ZLR7 823 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 LMBRD2Q68DH5 695 aaPredicted RBP13.84□□□□□ -0.19
USB1-207ENST00000563149 SPOPLQ6IQ16 392 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 LLGL2Q6P1M3 1020 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 PCGF5Q86SE9 256 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 CCDC60Q8IWA6 550 aaPredicted RBP13.84□□□□□ -0.19
USB1-207ENST00000563149 FITM2Q8N6M3 262 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 UBR7Q8N806 425 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 FBF1Q8TES7 1133 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 TEPSINQ96N21 525 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 PWWP2AQ96N64 755 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 FRMD8P1Q9BZ68 369 aaPredicted RBP13.84□□□□□ -0.19
USB1-207ENST00000563149 SAYSD1Q9NPB0 183 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 FETUBQ9UGM5 382 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 TBK1Q9UHD2 729 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 SLC24A2Q9UI40 661 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 USTQ9Y2C2 406 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 FER1L6Q2WGJ9 1857 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 PARP14Q460N5 1801 aa13.84□□□□□ -0.19
USB1-207ENST00000563149 SPATA31C2B4DYI2 1134 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 K7ERI5 159 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 IGF2BP3O00425 579 aaKnown RBP eCLIP13.83□□□□□ -0.19
USB1-207ENST00000563149 ALOX15BO15296 676 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 GH1P01241 217 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 SSR1P43307 286 aaKnown RBP13.83□□□□□ -0.19
USB1-207ENST00000563149 POLGP54098 1239 aaPredicted RBP13.83□□□□□ -0.19
USB1-207ENST00000563149 NOP14P78316 857 aaKnown RBP13.83□□□□□ -0.19
USB1-207ENST00000563149 SF3A3Q12874 501 aaKnown RBP eCLIP13.83□□□□□ -0.19
USB1-207ENST00000563149 PIGHQ14442 188 aaPredicted RBP13.83□□□□□ -0.19
USB1-207ENST00000563149 SPARCL1Q14515 664 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 E2F5Q15329 346 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 TMED2Q15363 201 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 MTERF2Q49AM1 385 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 TMEM63BQ5T3F8 832 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 CGB2Q6NT52 195 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 TLDC1Q6P9B6 456 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 GPATCH11Q8N954 259 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 REPS2Q8NFH8 660 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 DEPTORQ8TB45 409 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 DENND1AQ8TEH3 1009 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 ZNF606Q8WXB4 792 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 NKD2Q969F2 451 aaPredicted RBP13.83□□□□□ -0.19
USB1-207ENST00000563149 ATG4CQ96DT6 458 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 RAB3IPQ96QF0 476 aaPredicted RBP13.83□□□□□ -0.19
USB1-207ENST00000563149 IMPG2Q9BZV3 1241 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 PORCNQ9H237 461 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 SSU72Q9NP77 194 aaKnown RBP13.83□□□□□ -0.19
USB1-207ENST00000563149 MYOZ2Q9NPC6 264 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 ZNF277Q9NRM2 450 aaPredicted RBP13.83□□□□□ -0.19
USB1-207ENST00000563149 TXLNGQ9NUQ3 528 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 SHOC2Q9UQ13 582 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 ZNF148Q9UQR1 794 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 EFR3BQ9Y2G0 817 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.83□□□□□ -0.19
USB1-207ENST00000563149 COL4A5P29400 1685 aa13.83□□□□□ -0.19
USB1-207ENST00000563149 A0A0B4J269 797 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 WFS1O76024 890 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 RGS20O76081 388 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 ATG7O95352 703 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 KRT1P04264 644 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 ITGAVP06756 1048 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 CFHP08603 1231 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 ARL2P36404 184 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 ACOT2P49753 483 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 ALDH5A1P51649 535 aaPredicted RBP13.83□□□□□ -0.2
USB1-207ENST00000563149 YARSP54577 528 aaKnown RBP13.83□□□□□ -0.2
USB1-207ENST00000563149 KCNJ2P63252 427 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 MTMR2Q13614 643 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 C2CD6Q53TS8 623 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 ZC3H12AQ5D1E8 599 aaKnown RBP13.83□□□□□ -0.2
USB1-207ENST00000563149 SPDYAQ5MJ70 313 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 SPOCD1Q6ZMY3 1216 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 CENPUQ71F23 418 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 PASD1Q8IV76 773 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 NIPA2Q8N8Q9 360 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 MSTO1Q9BUK6 570 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 DHX33Q9H6R0 707 aaKnown RBP13.83□□□□□ -0.2
USB1-207ENST00000563149 AS3MTQ9HBK9 375 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 PCDH9Q9HC56 1237 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 MLXIPLQ9NP71 852 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 DNPEPQ9ULA0 475 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms