RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 DSG1Q02413 1049 aa20.19■□□□□ 0.82
RAB40C-207ENST00000563109 CREMQ03060 361 aa20.19■□□□□ 0.82
RAB40C-207ENST00000563109 GRIN2CQ14957 1233 aa20.19■□□□□ 0.82
RAB40C-207ENST00000563109 PLPP4Q5VZY2 271 aa20.19■□□□□ 0.82
RAB40C-207ENST00000563109 ANKS3Q6ZW76 656 aa20.19■□□□□ 0.82
RAB40C-207ENST00000563109 TAS1R1Q7RTX1 841 aa20.19■□□□□ 0.82
RAB40C-207ENST00000563109 TOP6BLQ8N6T0 577 aa20.19■□□□□ 0.82
RAB40C-207ENST00000563109 RIN2Q8WYP3 895 aaPredicted RBP20.19■□□□□ 0.82
RAB40C-207ENST00000563109 SEMA4DQ92854 862 aa20.19■□□□□ 0.82
RAB40C-207ENST00000563109 GAS2L1Q99501 681 aaPredicted RBP20.19■□□□□ 0.82
RAB40C-207ENST00000563109 NIF3L1Q9GZT8 377 aa20.19■□□□□ 0.82
RAB40C-207ENST00000563109 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.19■□□□□ 0.825e-7■■■■■ 252.6
RAB40C-207ENST00000563109 ATG2AQ2TAZ0 1938 aa20.19■□□□□ 0.82
RAB40C-207ENST00000563109 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-207ENST00000563109 LGALS16A8MUM7 142 aa20.18■□□□□ 0.82
RAB40C-207ENST00000563109 H7C4K7 107 aa20.18■□□□□ 0.82
RAB40C-207ENST00000563109 C2CD2LO14523 706 aa20.18■□□□□ 0.82
RAB40C-207ENST00000563109 YWHAHQ04917 246 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-207ENST00000563109 EXOC3L4Q17RC7 722 aa20.18■□□□□ 0.82
RAB40C-207ENST00000563109 RTP2Q5QGT7 225 aa20.18■□□□□ 0.82
RAB40C-207ENST00000563109 VARS2Q5ST30 1063 aaKnown RBP20.18■□□□□ 0.82
RAB40C-207ENST00000563109 SCARA5Q6ZMJ2 495 aa20.18■□□□□ 0.82
RAB40C-207ENST00000563109 DPH6Q7L8W6 267 aa20.18■□□□□ 0.82
RAB40C-207ENST00000563109 ADGRF2Q8IZF7 708 aa20.18■□□□□ 0.82
RAB40C-207ENST00000563109 TMEM86AQ8N2M4 240 aa20.18■□□□□ 0.82
RAB40C-207ENST00000563109 MRPL38Q96DV4 380 aaKnown RBP20.18■□□□□ 0.82
RAB40C-207ENST00000563109 B3GALT6Q96L58 329 aa20.18■□□□□ 0.82
RAB40C-207ENST00000563109 NT5C1BQ96P26 610 aa20.18■□□□□ 0.82
RAB40C-207ENST00000563109 INTS2Q9H0H0 1204 aaKnown RBP20.18■□□□□ 0.82
RAB40C-207ENST00000563109 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.18■□□□□ 0.82
RAB40C-207ENST00000563109 CHST7Q9NS84 486 aa20.18■□□□□ 0.82
RAB40C-207ENST00000563109 LRRC10BA6NIK2 292 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 FSCN2O14926 492 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 CYP11A1P05108 521 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 FXR1P51114 621 aaKnown RBP eCLIP20.17■□□□□ 0.82
RAB40C-207ENST00000563109 ERVFC1P60507 584 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 PTPN14Q15678 1187 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 PSMD5Q16401 504 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 OVOS1Q6IE37 1185 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 SPOPLQ6IQ16 392 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 ZNF280DQ6N043 979 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 GPR65Q8IYL9 337 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 EHBP1Q8NDI1 1231 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 SPATA18Q8TC71 538 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 PIK3R5Q8WYR1 880 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 PPP2R3CQ969Q6 453 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 FAXDC2Q96IV6 333 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 CRACR2AQ9BSW2 395 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 L1RE1Q9UN81 338 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 POLIQ9UNA4 740 aa20.17■□□□□ 0.82
RAB40C-207ENST00000563109 TIMM13Q9Y5L4 95 aaPredicted RBP20.17■□□□□ 0.82
RAB40C-207ENST00000563109 CXCL14O95715 111 aa20.16■□□□□ 0.82
RAB40C-207ENST00000563109 FANCCQ00597 558 aa20.16■□□□□ 0.82
RAB40C-207ENST00000563109 UBXN1Q04323 297 aa20.16■□□□□ 0.82
RAB40C-207ENST00000563109 LRMPQ12912 555 aa20.16■□□□□ 0.82
RAB40C-207ENST00000563109 WSCD1Q658N2 575 aa20.16■□□□□ 0.82
RAB40C-207ENST00000563109 THEM5Q8N1Q8 247 aa20.16■□□□□ 0.82
RAB40C-207ENST00000563109 PDCL2Q8N4E4 241 aa20.16■□□□□ 0.82
RAB40C-207ENST00000563109 DEFB123Q8N688 67 aa20.16■□□□□ 0.82
RAB40C-207ENST00000563109 AUTS2Q8WXX7 1259 aa20.16■□□□□ 0.82
RAB40C-207ENST00000563109 ELMO3Q96BJ8 720 aa20.16■□□□□ 0.82
RAB40C-207ENST00000563109 EMILIN2Q9BXX0 1053 aa20.16■□□□□ 0.82
RAB40C-207ENST00000563109 OXCT2Q9BYC2 517 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-207ENST00000563109 APOBEC3GQ9HC16 384 aaKnown RBP20.16■□□□□ 0.82
RAB40C-207ENST00000563109 LMCD1Q9NZU5 365 aa20.16■□□□□ 0.82
RAB40C-207ENST00000563109 TBXAS1P24557 533 aaPredicted RBP20.15■□□□□ 0.82
RAB40C-207ENST00000563109 IRS1P35568 1242 aa20.15■□□□□ 0.82
RAB40C-207ENST00000563109 CAMK1Q14012 370 aa20.15■□□□□ 0.82
RAB40C-207ENST00000563109 SOWAHAQ2M3V2 549 aa20.15■□□□□ 0.82
RAB40C-207ENST00000563109 CTXN3Q4LDR2 81 aa20.15■□□□□ 0.82
RAB40C-207ENST00000563109 KIAA0319Q5VV43 1072 aa20.15■□□□□ 0.82
RAB40C-207ENST00000563109 TRIM65Q6PJ69 517 aa20.15■□□□□ 0.82
RAB40C-207ENST00000563109 PRSS55Q6UWB4 352 aaPredicted RBP20.15■□□□□ 0.82
RAB40C-207ENST00000563109 Q7L0L9 218 aa20.15■□□□□ 0.82
RAB40C-207ENST00000563109 APTXQ7Z2E3 356 aaKnown RBP20.15■□□□□ 0.82
RAB40C-207ENST00000563109 SNX25Q9H3E2 840 aa20.15■□□□□ 0.82
RAB40C-207ENST00000563109 SMYD3Q9H7B4 428 aa20.15■□□□□ 0.82
RAB40C-207ENST00000563109 CYP3A43Q9HB55 503 aa20.15■□□□□ 0.82
RAB40C-207ENST00000563109 MTRRQ9UBK8 725 aa20.15■□□□□ 0.82
RAB40C-207ENST00000563109 LRRN2O75325 713 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 TACC1O75410 805 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 TPM3P06753 285 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 FAM163BP0C2L3 166 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 IGFBP4P22692 258 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 ASPAP45381 313 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 LHX1P48742 406 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 YWHAEP62258 255 aaKnown RBP20.14■□□□□ 0.81
RAB40C-207ENST00000563109 PPM1KQ8N3J5 372 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 MRPL43Q8N983 215 aaKnown RBP20.14■□□□□ 0.81
RAB40C-207ENST00000563109 LMO3Q8TAP4 145 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 LNX1Q8TBB1 728 aaPredicted RBP20.14■□□□□ 0.81
RAB40C-207ENST00000563109 FAM81BQ96LP2 452 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 PCMTD1Q96MG8 357 aaPredicted RBP20.14■□□□□ 0.81
RAB40C-207ENST00000563109 DNAI2Q9GZS0 605 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 RBSNQ9H1K0 784 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 BACE2Q9Y5Z0 518 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 IRAK3Q9Y616 596 aa20.14■□□□□ 0.81
RAB40C-207ENST00000563109 LAMA2P24043 3122 aaKnown RBP20.14■□□□□ 0.81
RAB40C-207ENST00000563109 C2orf71A6NGG8 1288 aa20.13■□□□□ 0.81
RAB40C-207ENST00000563109 OR6C75A6NL08 312 aa20.13■□□□□ 0.81
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