RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ECSITQ9BQ95 431 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 EIF2AK1Q9BQI3 630 aaKnown RBP14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 LRRC27Q9C0I9 530 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 UBN1Q9NPG3 1134 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 SAR1AQ9NR31 198 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 PCDHA2Q9Y5H9 948 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 FAM47DPA6NHR8 397 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 SPAG7O75391 227 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 ARP10275 920 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 CETPP11597 493 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 VCAM1P19320 739 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 RPA1P27694 616 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 GALK1P51570 392 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 KCNA1Q09470 495 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 CALCOCO2Q13137 446 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 KYNUQ16719 465 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 CTC1Q2NKJ3 1217 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 ZNF568Q3ZCX4 644 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 RUSC1Q9BVN2 902 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 ARHGEF38Q9NXL2 777 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 PCYOX1Q9UHG3 505 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 NAALADL1Q9UQQ1 740 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 NFIBO00712 420 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 MAGEB2O15479 319 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 HNRNPCL1O60812 293 aaKnown RBP14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 ASNSP08243 561 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 KCNH2Q12809 1159 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 TMEM259Q4ZIN3 620 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 SLC44A4Q53GD3 710 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 SLC45A4Q5BKX6 768 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 SFR1Q86XK3 245 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 PPP1R14BQ96C90 147 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 RANBP17Q9H2T7 1088 aaKnown RBP14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 AAASQ9NRG9 546 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 SPATA7Q9P0W8 599 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 ANGPTL2Q9UKU9 493 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 ADGRA3Q8IWK6 1321 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 CFAP69A5D8W1 941 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 EDF1O60869 148 aaKnown RBP14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 AMPD1P23109 780 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 MOXD1Q6UVY6 613 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 FAM83AQ86UY5 434 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 ZDHHC14Q8IZN3 488 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 ERMNQ8TAM6 284 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 CORO1BQ9BR76 489 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 ARL8BQ9NVJ2 186 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 CCPG1Q9ULG6 757 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 NENFQ9UMX5 172 aa14.81□□□□□ -0.04
GTF3C1-203ENST00000562609 RASA4BC9J798 803 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 RASA4O43374 803 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 ATP9BO43861 1147 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 ASMTLO95671 621 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 HARSP12081 509 aaKnown RBP14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 VARSP26640 1264 aaKnown RBP14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 CIITAP33076 1130 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 KCNJ1P48048 391 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 PHEXP78562 749 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 SPDYAQ5MJ70 313 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 MICALL2Q8IY33 904 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 FAM20AQ96MK3 541 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 SH2D3AQ9BRG2 576 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 DDX18Q9NVP1 670 aaKnown RBP14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 COL20A1Q9P218 1284 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 ZNF711Q9Y462 761 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 COL2A1P02458 1487 aaPredicted RBP14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 IGSF9BQ9UPX0 1349 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 PIK3CDO00329 1044 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 CHKAP35790 457 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 KBTBD12Q3ZCT8 623 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 OTOP1Q7RTM1 612 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 ANKRD35Q8N283 1001 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 SLC16A10Q8TF71 515 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 SPIRE2Q8WWL2 714 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 PPP2R3CQ969Q6 453 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 ZBED3Q96IU2 234 aaPredicted RBP14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 TEPSINQ96N21 525 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 SMC6Q96SB8 1091 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 OXCT2Q9BYC2 517 aaPredicted RBP14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 RAVER2Q9HCJ3 691 aaKnown RBP14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 NPHS2Q9NP85 383 aa14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 WRAP73Q9P2S5 460 aaPredicted RBP14.8□□□□□ -0.04
GTF3C1-203ENST00000562609 TBX3O15119 743 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 ZWINTO95229 277 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 TTC4O95801 387 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 ALAS1P13196 640 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 PRKCIP41743 596 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 PRELPP51888 382 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 PPATQ06203 517 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 NBPF12Q5TAG4 269 aaPredicted RBP14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 C17orf50Q8WW18 174 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 RFFLQ8WZ73 363 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 POP1Q99575 1024 aaKnown RBP14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 SIKE1Q9BRV8 207 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 EBF3Q9H4W6 596 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 PTTG2Q9NZH5 202 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 SMIM31A0A1B0GVY4 71 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 THAP12O43422 761 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 TBC1D12O60347 775 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 SLITRK3O94933 977 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 RGS2P41220 211 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms