RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 VARS2Q5ST30 1063 aaKnown RBP17.58■□□□□ 0.4
USB1-206ENST00000562534 RBM23Q86U06 439 aaKnown RBP17.58■□□□□ 0.4
USB1-206ENST00000562534 THEM5Q8N1Q8 247 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 TMEM86AQ8N2M4 240 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 TOP6BLQ8N6T0 577 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 FBXL13Q8NEE6 735 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 SPATA18Q8TC71 538 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 CNOT6LQ96LI5 555 aaKnown RBP17.58■□□□□ 0.4
USB1-206ENST00000562534 SAMSN1Q9NSI8 373 aaKnown RBP17.58■□□□□ 0.4
USB1-206ENST00000562534 RAB20Q9NX57 234 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 COQ4Q9Y3A0 265 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 HLA-DRAP01903 254 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 AFPP02771 609 aaKnown RBP17.57■□□□□ 0.4
USB1-206ENST00000562534 ADH1AP07327 375 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 EEF1GP26641 437 aaKnown RBP17.57■□□□□ 0.4
USB1-206ENST00000562534 PIK3CAP42336 1068 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 NRIP1P48552 1158 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 FMO5P49326 533 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 NDUFV1P49821 464 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 TNNC1P63316 161 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 DUSP6Q16828 381 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 ZNF667Q5HYK9 610 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 WDR44Q5JSH3 913 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 OVOS1Q6IE37 1185 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 PRSS55Q6UWB4 352 aaPredicted RBP17.57■□□□□ 0.4
USB1-206ENST00000562534 MICALL1Q8N3F8 863 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 FAXDC2Q96IV6 333 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 MMS19Q96T76 1030 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 CLSTN3Q9BQT9 956 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 XYLT2Q9H1B5 865 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 FANCLQ9NW38 375 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 MTRRQ9UBK8 725 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 PCDHGC5Q9Y5F6 944 aa17.57■□□□□ 0.4
USB1-206ENST00000562534 TIMM13Q9Y5L4 95 aaPredicted RBP17.57■□□□□ 0.4
USB1-206ENST00000562534 KCNJ18B7U540 433 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 PER2O15055 1255 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 TEX28O15482 410 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 TBC1D4O60343 1298 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 CLASP2O75122 1294 aaKnown RBP17.56■□□□□ 0.4
USB1-206ENST00000562534 ASS1P00966 412 aaKnown RBP17.56■□□□□ 0.4
USB1-206ENST00000562534 LHX1P48742 406 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 KCNJ12Q14500 433 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 CCDC85BQ15834 202 aaPredicted RBP17.56■□□□□ 0.4
USB1-206ENST00000562534 SOWAHAQ2M3V2 549 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 ZNF699Q32M78 642 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 CTXN3Q4LDR2 81 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 CBWD6Q4V339 395 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 TCP11X2Q5H9J9 407 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 CBWD3Q5JTY5 395 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 CBWD5Q5RIA9 395 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 WSCD1Q658N2 575 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 ZNF280DQ6N043 979 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 ADGRD2Q7Z7M1 963 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 TAS1R2Q8TE23 839 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 TUBGCP2Q9BSJ2 902 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 IGFLR1Q9H665 355 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 NXF1Q9UBU9 619 aaKnown RBP17.56■□□□□ 0.4
USB1-206ENST00000562534 DPP7Q9UHL4 492 aa17.56■□□□□ 0.4
USB1-206ENST00000562534 OR6C75A6NL08 312 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 BECN2A8MW95 431 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 CDK11BP21127 795 aaKnown RBP17.55■□□□□ 0.4
USB1-206ENST00000562534 OR1D2P34982 312 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 HYAL1Q12794 435 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 ADAM15Q13444 863 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 RAB33AQ14088 237 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 MAN2A1Q16706 1144 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 CDKAL1Q5VV42 579 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 SLC8B1Q6J4K2 584 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 LIMS2Q7Z4I7 341 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 EFHBQ8N7U6 833 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 ANKRD20A12PQ8NF67 263 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 PPM1EQ8WY54 764 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 CHD7Q9P2D1 2997 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 FBXL5Q9UKA1 691 aa17.55■□□□□ 0.4
USB1-206ENST00000562534 SCN1AP35498 2009 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 TACC1O75410 805 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 CLSTN1O94985 981 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 TPM2P07951 284 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 SRGAP2BP0DMP2 458 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 NCAPHQ15003 741 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 HSP90AA4PQ58FG1 418 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 ELMSAN1Q6PJG2 1045 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 TMEM184AQ6ZMB5 413 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 PDCL2Q8N4E4 241 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 AOPEPQ8N6M6 819 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 EHBP1Q8NDI1 1231 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 MAFAQ8NHW3 353 aaPredicted RBP17.54■□□□□ 0.4
USB1-206ENST00000562534 ZNF461Q8TAF7 563 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 L1RE1Q9UN81 338 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 CDY1Q9Y6F8 540 aa17.54■□□□□ 0.4
USB1-206ENST00000562534 LRRC10BA6NIK2 292 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 GABRDO14764 452 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 RPL17P18621 184 aaKnown RBP17.53■□□□□ 0.4
USB1-206ENST00000562534 GNL1P36915 607 aaPredicted RBP17.53■□□□□ 0.4
USB1-206ENST00000562534 CLCN4P51793 760 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 MYL7Q01449 175 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 SKIV2LQ15477 1246 aaKnown RBP17.53■□□□□ 0.4
USB1-206ENST00000562534 CTC1Q2NKJ3 1217 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 VWA3BQ502W6 1294 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 LILRA6Q6PI73 481 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms