RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SECISBP2LQ93073 1101 aaKnown RBP7.02□□□□□ -1.29
CAPN3-210ENST00000561817 CDK15Q96Q40 435 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 FNBP1Q96RU3 617 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 TUBB2BQ9BVA1 445 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 AP5M1Q9H0R1 490 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 XYLT2Q9H1B5 865 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 ISCUQ9H1K1 167 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 TAS2R14Q9NYV8 317 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 HDAC6Q9UBN7 1215 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 AKT3Q9Y243 479 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 FAN1Q9Y2M0 1017 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 NUB1Q9Y5A7 615 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 PCDHGC5Q9Y5F6 944 aa7.02□□□□□ -1.29
CAPN3-210ENST00000561817 UMODL1Q5DID0 1318 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 RALGAPA2Q2PPJ7 1873 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 MACROD2A1Z1Q3 448 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 GRID2IPA4D2P6 1211 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 LACTBL1A8MY62 500 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 CYP26A1O43174 497 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 SEPT4O43236 478 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 TREHO43280 583 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 ZEB2O60315 1214 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 KPNA6O60684 536 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 MYL3P08590 195 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 CLTAP09496 248 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 H2AFZP0C0S5 128 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 CCDC172P0C7W6 258 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 STAG3L1P0CL83 205 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 HARSP12081 509 aaKnown RBP7.01□□□□□ -1.29
CAPN3-210ENST00000561817 DARSP14868 501 aaKnown RBP7.01□□□□□ -1.29
CAPN3-210ENST00000561817 TIMP2P16035 220 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 PRLRP16471 622 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 TNNI1P19237 187 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 GALCP54803 685 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 CACNB2Q08289 660 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-210ENST00000561817 NCOA4Q13772 614 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 SURF1Q15526 300 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 SLC10A6Q3KNW5 377 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 MFSD14CQ5VZR4 134 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 PPP2R2DQ66LE6 453 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 H2AFVQ71UI9 128 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 SLFN11Q7Z7L1 901 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 SLC47A2Q86VL8 602 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 BPHLQ86WA6 291 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-210ENST00000561817 TMEM130Q8N3G9 435 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 PPM1KQ8N3J5 372 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 ARMC2Q8NEN0 867 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 TRIM58Q8NG06 486 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 U2AF1L4Q8WU68 220 aaKnown RBP7.01□□□□□ -1.29
CAPN3-210ENST00000561817 TMEM40Q8WWA1 233 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 PMM1Q92871 262 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 IRF7Q92985 503 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 CPB2Q96IY4 423 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 FAM81BQ96LP2 452 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 MAP7D2Q96T17 732 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 PPP1R16BQ96T49 567 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.01□□□□□ -1.29
CAPN3-210ENST00000561817 CARD6Q9BX69 1037 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 TLR10Q9BXR5 811 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 BRINP2Q9C0B6 783 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 MTMR12Q9C0I1 747 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 ACP6Q9NPH0 428 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.01□□□□□ -1.29
CAPN3-210ENST00000561817 LIMD1Q9UGP4 676 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 SRRDQ9UH36 339 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 SIX4Q9UIU6 781 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 STXBP5LQ9Y2K9 1186 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 GRIN2DO15399 1336 aa7.01□□□□□ -1.29
CAPN3-210ENST00000561817 HTTP42858 3142 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 CCDC85CA6NKD9 419 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 PDE2AO00408 941 aaPredicted RBP7□□□□□ -1.29
CAPN3-210ENST00000561817 ENC1O14682 589 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 TACC1O75410 805 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 IL18RAPO95256 599 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 CALCAP01258 141 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 NFICP08651 508 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 TMEM253P0C7T8 217 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 CXCL8P10145 99 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 CYP2C9P11712 490 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 GZMAP12544 262 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 CYP11B1P15538 503 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 TNFAIP3P21580 790 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 FGFR4P22455 802 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 CST5P28325 142 aaPredicted RBP7□□□□□ -1.29
CAPN3-210ENST00000561817 CCND3P30281 292 aaPredicted RBP7□□□□□ -1.29
CAPN3-210ENST00000561817 GRM5P41594 1212 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 PIK3CAP42336 1068 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 MATR3P43243 847 aaKnown RBP eCLIP7□□□□□ -1.29
CAPN3-210ENST00000561817 HADHBP55084 474 aaKnown RBP7□□□□□ -1.29
CAPN3-210ENST00000561817 MYL6P60660 151 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 NOP14P78316 857 aaKnown RBP7□□□□□ -1.29
CAPN3-210ENST00000561817 CDC42EP1Q00587 391 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 CDR2Q01850 454 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 CUL2Q13617 745 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 PCBP1Q15365 356 aaKnown RBP eCLIP7□□□□□ -1.29
CAPN3-210ENST00000561817 KYAT1Q16773 422 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 WHAMMP3Q1A5X7 153 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 DUOXA2Q1HG44 320 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 KIZQ2M2Z5 673 aa7□□□□□ -1.29
CAPN3-210ENST00000561817 UBXN11Q5T124 520 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms