RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 KRBA1A5PL33 1030 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 OR6C75A6NL08 312 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 NRG2O14511 850 aaPredicted RBP18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 POLR2DO15514 142 aaKnown RBP18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 NPR3P17342 541 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 PTPN2P17706 415 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 GARTP22102 1010 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 CASP1P29466 404 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 TAF6P49848 677 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 PRSS36Q5K4E3 855 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 MTSS1LQ765P7 747 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 TCEAL4Q96EI5 215 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 TMEM209Q96SK2 561 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 LRRC27Q9C0I9 530 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 CRISPLD1Q9H336 500 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 PCIF1Q9H4Z3 704 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 RBAKQ9NYW8 714 aaPredicted RBP18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 CEP72Q9P209 647 aa18.6■□□□□ 0.57
CDC42BPB-208ENST00000561271 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 CCR2P41597 374 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 TFAMQ00059 246 aaKnown RBP18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 POU5F1Q01860 360 aaKnown RBP18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 RESP18Q5W5W9 173 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 ARMCX5Q6P1M9 558 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 POTEHQ6S545 545 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 HS6ST3Q8IZP7 471 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 ELMOD1Q8N336 334 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 TTC9BQ8N6N2 239 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 OR10T2Q8NGX3 314 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 MCRS1Q96EZ8 462 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 CHAMP1Q96JM3 812 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 PHOX2BQ99453 314 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 PYM1Q9BRP8 204 aaKnown RBP18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 OXCT2Q9BYC2 517 aaPredicted RBP18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 TMEM206Q9H813 350 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 AVENQ9NQS1 362 aaPredicted RBP18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 FAM86C1Q9NVL1 165 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 WNT16Q9UBV4 365 aa18.59■□□□□ 0.57
CDC42BPB-208ENST00000561271 MTMR11A4FU01 709 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 EXTL3O43909 919 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 AOC1P19801 751 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 POLR2BP30876 1174 aaKnown RBP18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 CLCN5P51795 746 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 CDR1P51861 262 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 AMPD3Q01432 767 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 GPR17Q13304 367 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 MYBPC2Q14324 1141 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 FAM26FQ5R3K3 315 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 STXBP4Q6ZWJ1 553 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 PDZD4Q76G19 769 aaPredicted RBP18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 ALYREFQ86V81 257 aaKnown RBP18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 NT5DC4Q86YG4 428 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 ZNF560Q96MR9 790 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 BLZF1Q9H2G9 400 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 MAGEF1Q9HAY2 307 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 ARHGEF3Q9NR81 526 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 SLC2A4RGQ9NR83 387 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 FAM13BQ9NYF5 915 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 MAFFQ9ULX9 164 aa18.58■□□□□ 0.56
CDC42BPB-208ENST00000561271 CYB561D2O14569 222 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 GALR2O43603 387 aaPredicted RBP18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 PI15O43692 258 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 LDHAP00338 332 aaKnown RBP18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 ITGB3P05106 788 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 CYP11A1P05108 521 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 MYL4P12829 197 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 RFX1P22670 979 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 PAX3P23760 479 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 HOXD13P35453 343 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 GPC5P78333 572 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 DUSP4Q13115 394 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 SV2CQ496J9 727 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 ATL3Q6DD88 541 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 IQCEQ6IPM2 695 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 CNNM4Q6P4Q7 775 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 GRAMD1CQ8IYS0 662 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 GPD1LQ8N335 351 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 ATAD1Q8NBU5 361 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 C7orf25Q9BPX7 421 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 RTP3Q9BQQ7 232 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 TBC1D17Q9HA65 648 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 PDE11AQ9HCR9 933 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 ASAH2Q9NR71 780 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 CFAP45Q9UL16 551 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 VPS13AQ96RL7 3174 aa18.57■□□□□ 0.56
CDC42BPB-208ENST00000561271 PTPRJQ12913 1337 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 H0Y858 1186 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 EIF3DO15371 548 aaKnown RBP eCLIP18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 SOAT2O75908 522 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 GJA1P17302 382 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 AFMP43652 599 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 MRE11P49959 708 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 WSCD1Q658N2 575 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 LMBRD2Q68DH5 695 aaPredicted RBP18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 SCARA3Q6AZY7 606 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 CENPPQ6IPU0 288 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 UNC13DQ70J99 1090 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 EPM2AIP1Q7L775 607 aaPredicted RBP18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 C1orf127Q8N9H9 656 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 ZNF512Q96ME7 567 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms