RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ANXA13P27216 316 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 TUFMP49411 452 aaKnown RBP11.48□□□□□ -0.57
TPM1-229ENST00000561242 MYL6P60660 151 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 KCNJ12Q14500 433 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 DUSP6Q16828 381 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 ANO6Q4KMQ2 910 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 TPGS2Q68CL5 300 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 TTI2Q6NXR4 508 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 PRSS55Q6UWB4 352 aaPredicted RBP11.48□□□□□ -0.57
TPM1-229ENST00000561242 RTL10Q7L3V2 364 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 EFHBQ8N7U6 833 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 OR5B17Q8NGF7 314 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 HDAC7Q8WUI4 952 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 PABPC5Q96DU9 382 aaKnown RBP11.48□□□□□ -0.57
TPM1-229ENST00000561242 CNOT6LQ96LI5 555 aaKnown RBP11.48□□□□□ -0.57
TPM1-229ENST00000561242 ZNF512Q96ME7 567 aaPredicted RBP11.48□□□□□ -0.57
TPM1-229ENST00000561242 NT5C1BQ96P26 610 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 GCNAQ96QF7 691 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 DNAJC25Q9H1X3 360 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 CHST7Q9NS84 486 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 DDX43Q9NXZ2 648 aaKnown RBP11.48□□□□□ -0.57
TPM1-229ENST00000561242 EHD2Q9NZN4 543 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 THEGQ9P2T0 379 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 IRAK3Q9Y616 596 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 M0QZQ0 153 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 FSCN2O14926 492 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 TEX28O15482 410 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 CLASP2O75122 1294 aaKnown RBP11.47□□□□□ -0.57
TPM1-229ENST00000561242 C1RP00736 705 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 C4BPAP04003 597 aaKnown RBP11.47□□□□□ -0.57
TPM1-229ENST00000561242 CNPP09543 421 aaKnown RBP11.47□□□□□ -0.57
TPM1-229ENST00000561242 KCNA5P22460 613 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 IRS1P35568 1242 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 EPHB3P54753 998 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 MRPS5P82675 430 aaKnown RBP11.47□□□□□ -0.57
TPM1-229ENST00000561242 KCNH2Q12809 1159 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 ADGRE1Q14246 886 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 MAN2A1Q16706 1144 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 UVSSAQ2YD98 709 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 ZACNQ401N2 412 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 ZCWPW2Q504Y3 356 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 KIAA0319Q5VV43 1072 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 WSCD1Q658N2 575 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 TAS1R1Q7RTX1 841 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 SPRED2Q7Z698 418 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 TMEM173Q86WV6 379 aaPredicted RBP11.47□□□□□ -0.57
TPM1-229ENST00000561242 KREMEN2Q8NCW0 462 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 ZSWIM2Q8NEG5 633 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 C2orf15Q8WU43 125 aaKnown RBP11.47□□□□□ -0.57
TPM1-229ENST00000561242 B3GALT6Q96L58 329 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 TUBGCP2Q9BSJ2 902 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 TSPY26PQ9H489 355 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 SFXN1Q9H9B4 322 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 CYP3A43Q9HB55 503 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 RXFP1Q9HBX9 757 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 GDAP2Q9NXN4 497 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 TMEM63CQ9P1W3 806 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 CD207Q9UJ71 328 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 PCDHB5Q9Y5E4 795 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 MYH15Q9Y2K3 1946 aa11.47□□□□□ -0.57
TPM1-229ENST00000561242 ARID2Q68CP9 1835 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 HIDE1A8MVS5 230 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 OAZ2O95190 189 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 CST3P01034 146 aaPredicted RBP11.46□□□□□ -0.57
TPM1-229ENST00000561242 PDGFRBP09619 1106 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 RPL17P18621 184 aaKnown RBP11.46□□□□□ -0.57
TPM1-229ENST00000561242 DNAJB1P25685 340 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 MTHFRP42898 656 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 FMO5P49326 533 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 PMS1P54277 932 aaKnown RBP11.46□□□□□ -0.57
TPM1-229ENST00000561242 MFAP3P55082 362 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 RPL10AP62906 217 aaKnown RBP11.46□□□□□ -0.57
TPM1-229ENST00000561242 DLG4P78352 724 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 PLCB2Q00722 1185 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 CYP27A1Q02318 531 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 ITIH3Q06033 890 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 NAB2Q15742 525 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 MGAT5BQ3V5L5 792 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 SLC39A12Q504Y0 691 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 RTP2Q5QGT7 225 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 CYP4A22Q5TCH4 519 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 TDRD10Q5VZ19 366 aaKnown RBP11.46□□□□□ -0.57
TPM1-229ENST00000561242 CYP26C1Q6V0L0 522 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 SCARA5Q6ZMJ2 495 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 ITIH5Q86UX2 942 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 PPM1KQ8N3J5 372 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 AOPEPQ8N6M6 819 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 ZNF461Q8TAF7 563 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 LNX1Q8TBB1 728 aaPredicted RBP11.46□□□□□ -0.57
TPM1-229ENST00000561242 BCL7CQ8WUZ0 217 aaPredicted RBP11.46□□□□□ -0.57
TPM1-229ENST00000561242 FAXDC2Q96IV6 333 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 DUSP9Q99956 384 aaKnown RBP11.46□□□□□ -0.57
TPM1-229ENST00000561242 ACBD6Q9BR61 282 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 NIF3L1Q9GZT8 377 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 CXCL16Q9H2A7 254 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 PDCL3Q9H2J4 239 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 UBE2ZQ9H832 354 aaPredicted RBP11.46□□□□□ -0.57
TPM1-229ENST00000561242 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.46□□□□□ -0.57
TPM1-229ENST00000561242 MAN1C1Q9NR34 630 aa11.46□□□□□ -0.57
TPM1-229ENST00000561242 MTRRQ9UBK8 725 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 216.4 ms