RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 POSTNQ15063 836 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 DSTYKQ6XUX3 929 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 BRSK2Q8IWQ3 736 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 CCDC65Q8IXS2 484 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 OR10T2Q8NGX3 314 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 ACCSQ96QU6 501 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 RTP3Q9BQQ7 232 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 CBWD1Q9BRT8 395 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 SCAND2PQ9GZW5 306 aaPredicted RBP17.28■□□□□ 0.36
LMX1B-204ENST00000561065 TNMDQ9H2S6 317 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 TBC1D17Q9HA65 648 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 MAGEF1Q9HAY2 307 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 ARHGEF3Q9NR81 526 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 PANK4Q9NVE7 773 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 KBTBD4Q9NVX7 518 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 RCOR1Q9UKL0 485 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 PATJQ8NI35 1801 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 PRPF6O94906 941 aaKnown RBP17.27■□□□□ 0.36
LMX1B-204ENST00000561065 ODC1P11926 461 aa17.27■□□□□ 0.36
LMX1B-204ENST00000561065 NUBP1P53384 320 aa17.27■□□□□ 0.36
LMX1B-204ENST00000561065 GPC5P78333 572 aa17.27■□□□□ 0.36
LMX1B-204ENST00000561065 OVOS1Q6IE37 1185 aa17.27■□□□□ 0.36
LMX1B-204ENST00000561065 MTSS1LQ765P7 747 aa17.27■□□□□ 0.36
LMX1B-204ENST00000561065 DHX58Q96C10 678 aa17.27■□□□□ 0.36
LMX1B-204ENST00000561065 MCRS1Q96EZ8 462 aa17.27■□□□□ 0.36
LMX1B-204ENST00000561065 FAM213AQ9BRX8 229 aa17.27■□□□□ 0.36
LMX1B-204ENST00000561065 PLA2G2FQ9BZM2 168 aa17.27■□□□□ 0.36
LMX1B-204ENST00000561065 TRIM9Q9C026 710 aa17.27■□□□□ 0.36
LMX1B-204ENST00000561065 DNAJC25Q9H1X3 360 aa17.27■□□□□ 0.36
LMX1B-204ENST00000561065 NCANO14594 1321 aa17.27■□□□□ 0.36
LMX1B-204ENST00000561065 OBSL1O75147 1896 aa17.27■□□□□ 0.35
LMX1B-204ENST00000561065 NUP210Q8TEM1 1887 aaPredicted RBP17.27■□□□□ 0.35
LMX1B-204ENST00000561065 TICRRQ7Z2Z1 1910 aa17.27■□□□□ 0.35
LMX1B-204ENST00000561065 MTMR11A4FU01 709 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 GOLGA8IPA6NC78 632 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 OR6C75A6NL08 312 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 GOLGA8JA6NMD2 632 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 CYP11A1P05108 521 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 PTPN2P17706 415 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 HOXD13P35453 343 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 EPHA5P54756 1037 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 NUCB2P80303 420 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 POU5F1Q01860 360 aaKnown RBP17.26■□□□□ 0.35
LMX1B-204ENST00000561065 USP37Q86T82 979 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 CCDC105Q8IYK2 499 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 BORCS6Q96GS4 357 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 CCDC34Q96HJ3 373 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 DPP3Q9NY33 737 aa17.26■□□□□ 0.35
LMX1B-204ENST00000561065 SOAT2O75908 522 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 GJA1P17302 382 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 CASP1P29466 404 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 CDR1P51861 262 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 DNM1Q05193 864 aaKnown RBP17.25■□□□□ 0.35
LMX1B-204ENST00000561065 DUSP4Q13115 394 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 GPR17Q13304 367 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 TMC8Q8IU68 726 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 CEP57L1Q8IYX8 460 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 ATAD1Q8NBU5 361 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 CXorf38Q8TB03 319 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 SPATA32Q96LK8 384 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 LRRC3Q9BY71 257 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 GDE1Q9NZC3 331 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 DENND4CQ5VZ89 1909 aa17.25■□□□□ 0.35
LMX1B-204ENST00000561065 IL18RAPO95256 599 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 GARTP22102 1010 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 TAF6P49848 677 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 MYBPC2Q14324 1141 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 TANGO2Q6ICL3 276 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 CENPPQ6IPU0 288 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 PDZD4Q76G19 769 aaPredicted RBP17.24■□□□□ 0.35
LMX1B-204ENST00000561065 C1orf127Q8N9H9 656 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 CHAMP1Q96JM3 812 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 ZSWIM3Q96MP5 696 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 OXCT2Q9BYC2 517 aaPredicted RBP17.24■□□□□ 0.35
LMX1B-204ENST00000561065 FOXQ1Q9C009 403 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 PCIF1Q9H4Z3 704 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 TMEM206Q9H813 350 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 RBAKQ9NYW8 714 aaPredicted RBP17.24■□□□□ 0.35
LMX1B-204ENST00000561065 DLGAP2Q9P1A6 1054 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 USP25Q9UHP3 1055 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 MAFFQ9ULX9 164 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 PCDHA7Q9UN72 937 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 PTPRJQ12913 1337 aa17.24■□□□□ 0.35
LMX1B-204ENST00000561065 KIF26AQ9ULI4 1882 aaPredicted RBP17.24■□□□□ 0.35
LMX1B-204ENST00000561065 LRRN2O75325 713 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 ECI2O75521 394 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 GLULP15104 373 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 PAX3P23760 479 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 ASIC1P78348 528 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 EHHADHQ08426 723 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 FAM78AQ5JUQ0 283 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 WSCD1Q658N2 575 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 PHLDB3Q6NSJ2 640 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 CNNM4Q6P4Q7 775 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 EPM2AIP1Q7L775 607 aaPredicted RBP17.23■□□□□ 0.35
LMX1B-204ENST00000561065 SYCP3Q8IZU3 236 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 DTWD2Q8NBA8 298 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 SHKBP1Q8TBC3 707 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 ATOH1Q92858 354 aaPredicted RBP17.23■□□□□ 0.35
LMX1B-204ENST00000561065 ZCWPW1Q9H0M4 648 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms