RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 SEMA4AQ9H3S1 761 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 LTB4R2Q9NPC1 389 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 SEL1LQ9UBV2 794 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 SP9P0CG40 484 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 GJA1P17302 382 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 ADSSP30520 456 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 EPHB3P54753 998 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 PLD1Q13393 1074 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 POSTNQ15063 836 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 ARMCX5Q6P1M9 558 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 CRELD2Q6UXH1 353 aaPredicted RBP17.56■□□□□ 0.4
SNX1-213ENST00000561026 TPRG1Q6ZUI0 275 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 ADSSL1Q8N142 457 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 ATAD1Q8NBU5 361 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 POMGNT1Q8WZA1 660 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 DNASE1L2Q92874 299 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 DNAJC19Q96DA6 116 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 NELL2Q99435 816 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 TRMT61BQ9BVS5 477 aaKnown RBP17.56■□□□□ 0.4
SNX1-213ENST00000561026 LRRC3Q9BY71 257 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 MRPL44Q9H9J2 332 aaKnown RBP17.56■□□□□ 0.4
SNX1-213ENST00000561026 HEBP1Q9NRV9 189 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 SLC27A5Q9Y2P5 690 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 MORC2Q9Y6X9 1032 aaPredicted RBP17.56■□□□□ 0.4
SNX1-213ENST00000561026 COL4A3Q01955 1670 aa17.56■□□□□ 0.4
SNX1-213ENST00000561026 EP300Q09472 2414 aaPredicted RBP17.56■□□□□ 0.4
SNX1-213ENST00000561026 CYP11A1P05108 521 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 GAP43P17677 238 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 ALDH1A3P47895 512 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 KCNA1Q09470 495 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 GRM2Q14416 872 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 SLC39A14Q15043 492 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 ZNF852Q6ZMS4 543 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 MAML2Q8IZL2 1156 aaPredicted RBP17.55■□□□□ 0.4
SNX1-213ENST00000561026 ZSCAN18Q8TBC5 510 aaPredicted RBP17.55■□□□□ 0.4
SNX1-213ENST00000561026 TMEM209Q96SK2 561 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 GPR88Q9GZN0 384 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 DNAJC25Q9H1X3 360 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 BRD9Q9H8M2 597 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 TRPV4Q9HBA0 871 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 DPP3Q9NY33 737 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 MTMR6Q9Y217 621 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 R4GN57 208 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 SPTBN4Q9H254 2564 aa17.55■□□□□ 0.4
SNX1-213ENST00000561026 MTMR11A4FU01 709 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 SHISA7A6NL88 538 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 PSMC3P17980 439 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 VIPR2P41587 438 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 MAGEA9P43362 315 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 TEAD2Q15562 447 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 VITQ6UXI7 678 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 CCDC73Q6ZRK6 1079 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 TMC8Q8IU68 726 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 OR10T2Q8NGX3 314 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 SHKBP1Q8TBC3 707 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 CLDN23Q96B33 292 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 ACCSQ96QU6 501 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 USP28Q96RU2 1077 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 TRPV5Q9NQA5 729 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 SPATA6Q9NWH7 488 aaPredicted RBP17.54■□□□□ 0.4
SNX1-213ENST00000561026 TBC1D7Q9P0N9 293 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 HSFX1Q9UBD0 423 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 DSEQ9UL01 958 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 EXOC7Q9UPT5 735 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 MRPS17Q9Y2R5 130 aaKnown RBP17.54■□□□□ 0.4
SNX1-213ENST00000561026 F5P12259 2224 aa17.54■□□□□ 0.4
SNX1-213ENST00000561026 LMNAP02545 664 aaKnown RBP17.53■□□□□ 0.4
SNX1-213ENST00000561026 TARSP26639 723 aaKnown RBP17.53■□□□□ 0.4
SNX1-213ENST00000561026 TAF6P49848 677 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 L1TD1Q5T7N2 865 aaKnown RBP17.53■□□□□ 0.4
SNX1-213ENST00000561026 ZC3H14Q6PJT7 736 aaKnown RBP17.53■□□□□ 0.4
SNX1-213ENST00000561026 DNAJB7Q7Z6W7 309 aaPredicted RBP17.53■□□□□ 0.4
SNX1-213ENST00000561026 EFCAB13Q8IY85 973 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 TTC9BQ8N6N2 239 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 KCNG4Q8TDN1 519 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 DEPDC1BQ8WUY9 529 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 IRF7Q92985 503 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 BACH2Q9BYV9 841 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 PANK2Q9BZ23 570 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 ZSCAN16Q9H4T2 348 aaPredicted RBP17.53■□□□□ 0.4
SNX1-213ENST00000561026 OLFML3Q9NRN5 406 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 ASB3Q9Y575 518 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 A0A087X0B3 334 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 A0A1W2PRU2 124 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 CYB561D2O14569 222 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 NCAM2O15394 837 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 LAMTOR5O43504 91 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 IL18RAPO95256 599 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 GCNT3O95395 438 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 IDEP14735 1019 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 GDI1P31150 447 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 STAT6P42226 847 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 RPS9P46781 194 aaKnown RBP17.53■□□□□ 0.4
SNX1-213ENST00000561026 CASP5P51878 434 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 FZD5Q13467 585 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 METTL23Q86XA0 190 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 NT5DC4Q86YG4 428 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 MFSD6LQ8IWD5 586 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 PSMG2Q969U7 264 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 BORCS6Q96GS4 357 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms