RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 C16orf45Q96MC5 204 aaPredicted RBP12.08□□□□□ -0.48
SNX1-212ENST00000560861 PACSIN1Q9BY11 444 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 ISCUQ9H1K1 167 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 HIPK3Q9H422 1215 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 GOLGA2P5Q9HBQ8 144 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 UBN1Q9NPG3 1134 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 SLC38A7Q9NVC3 462 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 GDAP2Q9NXN4 497 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 INTUQ9ULD6 942 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 NME7Q9Y5B8 376 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 BTNL10A8MVZ5 291 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 ENPP3O14638 875 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 IPO7O95373 1038 aaKnown RBP12.07□□□□□ -0.48
SNX1-212ENST00000560861 PARNO95453 639 aaKnown RBP12.07□□□□□ -0.48
SNX1-212ENST00000560861 CYP1A1P04798 512 aaPredicted RBP12.07□□□□□ -0.48
SNX1-212ENST00000560861 MMEP08473 750 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 GZMAP12544 262 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 KRT5P13647 590 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 TNFAIP3P21580 790 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 CYP2C18P33260 490 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 PNPLA4P41247 253 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 PDE6CP51160 858 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 SCNN1GP51170 649 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 RAD23BP54727 409 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 CDH8P55286 799 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 YWHAEP62258 255 aaKnown RBP12.07□□□□□ -0.48
SNX1-212ENST00000560861 ETF1P62495 437 aaKnown RBP12.07□□□□□ -0.48
SNX1-212ENST00000560861 PTPN14Q15678 1187 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 FNDC1Q4ZHG4 1894 aaPredicted RBP12.07□□□□□ -0.48
SNX1-212ENST00000560861 CLLU1OSQ5K130 101 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 CCDC122Q5T0U0 273 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 CD300LGQ6UXG3 332 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 KIAA1328Q86T90 577 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 SEPT8Q92599 483 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 APBB2Q92870 758 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 SCLYQ96I15 445 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 TWNKQ96RR1 684 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNX1-212ENST00000560861 IRX2Q9BZI1 471 aaPredicted RBP12.07□□□□□ -0.48
SNX1-212ENST00000560861 ELOVL4Q9GZR5 314 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 ELAC1Q9H777 363 aaKnown RBP12.07□□□□□ -0.48
SNX1-212ENST00000560861 LZTFL1Q9NQ48 299 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 TAS2R14Q9NYV8 317 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 NXF1Q9UBU9 619 aaKnown RBP12.07□□□□□ -0.48
SNX1-212ENST00000560861 HMGXB4Q9UGU5 601 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 SALL4Q9UJQ4 1053 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 NCANO14594 1321 aa12.07□□□□□ -0.48
SNX1-212ENST00000560861 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.06□□□□□ -0.48
SNX1-212ENST00000560861 KIF2AO00139 706 aaPredicted RBP12.06□□□□□ -0.48
SNX1-212ENST00000560861 KIAA0355O15063 1070 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 B4GALT3O60512 393 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 TUBB4AP04350 444 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 THP07101 528 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 CFHP08603 1231 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 PAEPP09466 180 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 CLTBP09497 229 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 UNGP13051 313 aaPredicted RBP12.06□□□□□ -0.48
SNX1-212ENST00000560861 TNNT1P13805 278 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 CD58P19256 250 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 IGFBP6P24592 240 aaPredicted RBP12.06□□□□□ -0.48
SNX1-212ENST00000560861 AARSP49588 968 aaKnown RBP eCLIP12.06□□□□□ -0.48
SNX1-212ENST00000560861 TAF6P49848 677 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 MYO1EQ12965 1108 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 GRIK3Q13003 919 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 TCEAL1Q15170 157 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 CLEC16AQ2KHT3 1053 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 ARHGAP29Q52LW3 1261 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 TAF3Q5VWG9 929 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 DNAAF5Q86Y56 855 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 SLC4A11Q8NBS3 891 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 KBTBD7Q8WVZ9 684 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 TFAP2BQ92481 460 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 ZNF560Q96MR9 790 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 WDR24Q96S15 920 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 RPS6KC1Q96S38 1066 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 MRPL45Q9BRJ2 306 aaKnown RBP12.06□□□□□ -0.48
SNX1-212ENST00000560861 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 TMEM161AQ9NX61 479 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 BARX2Q9UMQ3 279 aaPredicted RBP12.06□□□□□ -0.48
SNX1-212ENST00000560861 ATP11BQ9Y2G3 1177 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 DUSP10Q9Y6W6 482 aa12.06□□□□□ -0.48
SNX1-212ENST00000560861 TACC1O75410 805 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 H2AFZP0C0S5 128 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 FAM163BP0C2L3 166 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 P4HA1P13674 534 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 GNA15P30679 374 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 RPL9P32969 192 aaKnown RBP12.05□□□□□ -0.48
SNX1-212ENST00000560861 CDH5P33151 784 aaPredicted RBP12.05□□□□□ -0.48
SNX1-212ENST00000560861 GALCP54803 685 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 CCL23P55773 120 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 LILRA4P59901 499 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 TNNC1P63316 161 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 DSC1Q08554 894 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 KIF5AQ12840 1032 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 TUSC3Q13454 348 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 SOWAHAQ2M3V2 549 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 SV2CQ496J9 727 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 H2AFVQ71UI9 128 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 NECAB2Q7Z6G3 386 aa12.05□□□□□ -0.48
SNX1-212ENST00000560861 TTC39CQ8N584 583 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms