RNA–Protein interactions for RNA: ENST00000560502.5

LDLR-213, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-213ENST00000560502 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.2■□□□□ 0.02
LDLR-213ENST00000560502 WDR27A2RRH5 827 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 FAM170BA6NMN3 283 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 K7ERI5 159 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 MEFVO15553 781 aaPredicted RBP15.2■□□□□ 0.02
LDLR-213ENST00000560502 CEBPBP17676 345 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 PROZP22891 400 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 FCARP24071 287 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 NPTX2P47972 431 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 ASIC1P78348 528 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 PSMD2Q13200 908 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 UBXN2BQ14CS0 331 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 PRSS36Q5K4E3 855 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 VARS2Q5ST30 1063 aaKnown RBP15.2■□□□□ 0.02
LDLR-213ENST00000560502 LRRC15Q8TF66 581 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 NELL1Q92832 810 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 ZMAT2Q96NC0 199 aaKnown RBP15.2■□□□□ 0.02
LDLR-213ENST00000560502 PLIN2Q99541 437 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 CCDC94Q9BW85 323 aaPredicted RBP15.2■□□□□ 0.02
LDLR-213ENST00000560502 PLA2G2FQ9BZM2 168 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 BLZF1Q9H2G9 400 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 TMEM134Q9H6X4 195 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 TOPORSQ9NS56 1045 aaPredicted RBP15.2■□□□□ 0.02
LDLR-213ENST00000560502 SLC38A7Q9NVC3 462 aa15.2■□□□□ 0.02
LDLR-213ENST00000560502 SPATA6Q9NWH7 488 aaPredicted RBP15.2■□□□□ 0.02
LDLR-213ENST00000560502 FRYLO94915 3013 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 TICRRQ7Z2Z1 1910 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 PODXLO00592 558 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 SYN3O14994 580 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 SPTLC1O15269 473 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 LAMTOR5O43504 91 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 KLRC4O43908 158 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 PLA2G4BP0C869 781 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 MCF2P10911 925 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 KCNE1P15382 129 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 CD72P21854 359 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 TARSP26639 723 aaKnown RBP15.19■□□□□ 0.02
LDLR-213ENST00000560502 YARSP54577 528 aaKnown RBP15.19■□□□□ 0.02
LDLR-213ENST00000560502 PEX3P56589 373 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 MAPK7Q13164 816 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 FZD5Q13467 585 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 MRPL58Q14197 206 aaKnown RBP15.19■□□□□ 0.02
LDLR-213ENST00000560502 MCM6Q14566 821 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 ZNF568Q3ZCX4 644 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 KMT5BQ4FZB7 885 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 TPRG1Q6ZUI0 275 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.19■□□□□ 0.02
LDLR-213ENST00000560502 TCEAL8Q8IYN2 117 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 DCLK2Q8N568 766 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 SYT2Q8N9I0 419 aaPredicted RBP15.19■□□□□ 0.02
LDLR-213ENST00000560502 ELSPBP1Q96BH3 223 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 MCRS1Q96EZ8 462 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 BORCS6Q96GS4 357 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 MRPL4Q9BYD3 311 aaKnown RBP15.19■□□□□ 0.02
LDLR-213ENST00000560502 CNTN3Q9P232 1028 aa15.19■□□□□ 0.02
LDLR-213ENST00000560502 CCDC169A6NNP5 214 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 NRG2O14511 850 aaPredicted RBP15.18■□□□□ 0.02
LDLR-213ENST00000560502 HIP1RO75146 1068 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 MICAL2O94851 1124 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 SEC24AO95486 1093 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 ATF2P15336 505 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 PTPN2P17706 415 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 RPS9P46781 194 aaKnown RBP15.18■□□□□ 0.02
LDLR-213ENST00000560502 SLC12A3P55017 1021 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 OSTNP61366 133 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 NCAPHQ15003 741 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 TANGO2Q6ICL3 276 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 FOXR2Q6PJQ5 311 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 KCNK18Q7Z418 384 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 CCDC65Q8IXS2 484 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 ZNF687Q8N1G0 1237 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 ZBTB44Q8NCP5 570 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 DNASE1L2Q92874 299 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 NELL2Q99435 816 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 RUSC1Q9BVN2 902 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 TARS2Q9BW92 718 aaKnown RBP15.18■□□□□ 0.02
LDLR-213ENST00000560502 PRMT8Q9NR22 394 aaPredicted RBP15.18■□□□□ 0.02
LDLR-213ENST00000560502 DLL3Q9NYJ7 618 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 RWDD2AQ9UIY3 292 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 FBXL5Q9UKA1 691 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 PCDHGA2Q9Y5H1 932 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 INSL5Q9Y5Q6 135 aa15.18■□□□□ 0.02
LDLR-213ENST00000560502 DNAH14Q0VDD8 3507 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 MED19A0JLT2 244 aaPredicted RBP15.17■□□□□ 0.02
LDLR-213ENST00000560502 MYMKA6NI61 221 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 E9PMD0 336 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 PSMA7O14818 248 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 LILRB5O75023 590 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 KIF20AO95235 890 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 LRG1P02750 347 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 CDC25BP30305 580 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 RPL9P32969 192 aaKnown RBP15.17■□□□□ 0.02
LDLR-213ENST00000560502 CCR2P41597 374 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 PAK1Q13153 545 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 DMP1Q13316 513 aaPredicted RBP15.17■□□□□ 0.02
LDLR-213ENST00000560502 ZBTB41Q5SVQ8 909 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 TPGS2Q68CL5 300 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 ISM2Q6H9L7 571 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 MPZL3Q6UWV2 235 aa15.17■□□□□ 0.02
LDLR-213ENST00000560502 C1orf186Q6ZWK4 172 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms