RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CUTAO60888 179 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 NFICP08651 508 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 NPR3P17342 541 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 SURF1Q15526 300 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 MLF2Q15773 248 aaPredicted RBP15.22■□□□□ 0.03
TPM1-223ENST00000560445 ZBTB41Q5SVQ8 909 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 FAM173BQ6P4H8 233 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 C1orf228Q6PIY5 440 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 SPATA18Q8TC71 538 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 DEPDC1BQ8WUY9 529 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 ING5Q8WYH8 240 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 DNAJC19Q96DA6 116 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 BORCS6Q96GS4 357 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 GCNAQ96QF7 691 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 BCO2Q9BYV7 579 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 SEMA4AQ9H3S1 761 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 KIAA1586Q9HCI6 787 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 FAM13BQ9NYF5 915 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 RBAKQ9NYW8 714 aaPredicted RBP15.22■□□□□ 0.03
TPM1-223ENST00000560445 WDFY4Q6ZS81 3184 aa15.22■□□□□ 0.03
TPM1-223ENST00000560445 ANO9A1A5B4 782 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 KRBA1A5PL33 1030 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 ANKRD63C9JTQ0 380 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 EXTL3O43909 919 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 SEC24AO95486 1093 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 IGFBP6P24592 240 aaPredicted RBP15.21■□□□□ 0.03
TPM1-223ENST00000560445 NBL1P41271 181 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 EPHA5P54756 1037 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 STARD6P59095 220 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 GPC5P78333 572 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 TSPY1Q01534 308 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 ARHGAP15Q53QZ3 475 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 RNF19BQ6ZMZ0 732 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 BRSK2Q8IWQ3 736 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 DCP1BQ8IZD4 617 aaKnown RBP15.21■□□□□ 0.03
TPM1-223ENST00000560445 LRRC52Q8N7C0 313 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 PDILTQ8N807 584 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 SMARCD2Q92925 531 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 MCRS1Q96EZ8 462 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 MSANTD3Q96H12 275 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 FAM213AQ9BRX8 229 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 STRA6Q9BX79 667 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 SLITRK6Q9H5Y7 841 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 ITGA11Q9UKX5 1188 aa15.21■□□□□ 0.03
TPM1-223ENST00000560445 UBE4BO95155 1302 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 KANSL1LA0AUZ9 987 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 KPNA7A9QM74 516 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 MAN2B1O00754 1011 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 GFRA3O60609 400 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 ZSCAN22P10073 491 aaPredicted RBP15.2■□□□□ 0.02
TPM1-223ENST00000560445 MYL4P12829 197 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 CEBPBP17676 345 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 SNRPFP62306 86 aaKnown RBP15.2■□□□□ 0.02
TPM1-223ENST00000560445 ANGPT1Q15389 498 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 TAF12Q16514 161 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 NFE2Q16621 373 aaPredicted RBP15.2■□□□□ 0.02
TPM1-223ENST00000560445 PRSS36Q5K4E3 855 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 PJA1Q8NG27 643 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 SPPL2BQ8TCT7 592 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 IRF7Q92985 503 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 KXD1Q9BQD3 176 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 IER2Q9BTL4 223 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 TRMT61BQ9BVS5 477 aaKnown RBP15.2■□□□□ 0.02
TPM1-223ENST00000560445 BRD9Q9H8M2 597 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 TBC1D7Q9P0N9 293 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 TIMM13Q9Y5L4 95 aaPredicted RBP15.2■□□□□ 0.02
TPM1-223ENST00000560445 DOCK6Q96HP0 2047 aa15.2■□□□□ 0.02
TPM1-223ENST00000560445 ANK1P16157 1881 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 CYB561D2O14569 222 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 EIF3DO15371 548 aaKnown RBP eCLIP15.19■□□□□ 0.02
TPM1-223ENST00000560445 HUS1O60921 280 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 TMEM191BP0C7N4 346 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 ME1P48163 572 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 GUCY2FP51841 1108 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 ASIC1P78348 528 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 TFAMQ00059 246 aaKnown RBP15.19■□□□□ 0.02
TPM1-223ENST00000560445 MYL7Q01449 175 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 MYO1EQ12965 1108 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 DUSP4Q13115 394 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 SLC5A9Q2M3M2 681 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 SLC44A4Q53GD3 710 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 CENPPQ6IPU0 288 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 CNNM4Q6P4Q7 775 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 ZNF852Q6ZMS4 543 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 HS2ST1Q7LGA3 356 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 YAF2Q8IY57 180 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 TMEM86AQ8N2M4 240 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 GPD1LQ8N335 351 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 NKD2Q969F2 451 aaPredicted RBP15.19■□□□□ 0.02
TPM1-223ENST00000560445 ANKRD36BP1Q96IX9 119 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 PGLYRP2Q96PD5 576 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 PANK2Q9BZ23 570 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 TRPV4Q9HBA0 871 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 TRPV5Q9NQA5 729 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 KBTBD4Q9NVX7 518 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 CGNQ9P2M7 1197 aaKnown RBP15.19■□□□□ 0.02
TPM1-223ENST00000560445 TCHHQ07283 1943 aa15.19■□□□□ 0.02
TPM1-223ENST00000560445 MIA3Q5JRA6 1907 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 NOTCH4Q99466 2003 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 MTMR11A4FU01 709 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms