RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 WASF3Q9UPY6 502 aa17.06■□□□□ 0.32
AC243562.3-201ENST00000559866 CNOT1A5YKK6 2376 aaKnown RBP17.06■□□□□ 0.32
AC243562.3-201ENST00000559866 CACNA1GO43497 2377 aa17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 HARSP12081 509 aaKnown RBP17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 RPA1P27694 616 aa17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 MCM7P33993 719 aa17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 MPLP40238 635 aa17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 CDR1P51861 262 aa17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 EFNA5P52803 228 aa17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 PPP2R5AQ15172 486 aa17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 SAFBQ15424 915 aaKnown RBP eCLIP17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 TMEM209Q96SK2 561 aa17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 SMG9Q9H0W8 520 aaKnown RBP17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 BHMT2Q9H2M3 363 aa17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 SH2B1Q9NRF2 756 aaPredicted RBP17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 TOPORSQ9NS56 1045 aaPredicted RBP17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 DAXXQ9UER7 740 aaPredicted RBP17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 SLC27A5Q9Y2P5 690 aa17.05■□□□□ 0.32
AC243562.3-201ENST00000559866 NUP205Q92621 2012 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 K7ERI5 159 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 PEX3P56589 373 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 CYP4F8P98187 520 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 SPAG1Q07617 926 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 DUSP4Q13115 394 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 ME3Q16798 604 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 NAIF1Q69YI7 327 aaPredicted RBP17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 FSTL4Q6MZW2 842 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 UNQ6494/PRO21346Q6UXR6 183 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 CACNA2D4Q7Z3S7 1137 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 APBB1IPQ7Z5R6 666 aaPredicted RBP17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 NSUN7Q8NE18 718 aaKnown RBP17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 E2F7Q96AV8 911 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 LOXL4Q96JB6 756 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 IFT74Q96LB3 600 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 ACAP3Q96P50 834 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 GPR88Q9GZN0 384 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 MYH11P35749 1972 aa17.04■□□□□ 0.32
AC243562.3-201ENST00000559866 OTOL1A6NHN0 477 aaPredicted RBP17.03■□□□□ 0.32
AC243562.3-201ENST00000559866 M0QZQ0 153 aa17.03■□□□□ 0.32
AC243562.3-201ENST00000559866 JAK2O60674 1132 aa17.03■□□□□ 0.32
AC243562.3-201ENST00000559866 NEFLP07196 543 aa17.03■□□□□ 0.32
AC243562.3-201ENST00000559866 RPL9P32969 192 aaKnown RBP17.03■□□□□ 0.32
AC243562.3-201ENST00000559866 NPTX2P47972 431 aa17.03■□□□□ 0.32
AC243562.3-201ENST00000559866 SLC10A6Q3KNW5 377 aa17.03■□□□□ 0.32
AC243562.3-201ENST00000559866 ARHGAP29Q52LW3 1261 aa17.03■□□□□ 0.32
AC243562.3-201ENST00000559866 GPR158Q5T848 1215 aa17.03■□□□□ 0.32
AC243562.3-201ENST00000559866 C1orf228Q6PIY5 440 aa17.03■□□□□ 0.32
AC243562.3-201ENST00000559866 RIN3Q8TB24 985 aa17.03■□□□□ 0.32
AC243562.3-201ENST00000559866 TNRC6BQ9UPQ9 1833 aaKnown RBP17.03■□□□□ 0.32
AC243562.3-201ENST00000559866 SDK1Q7Z5N4 2213 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 MTMR11A4FU01 709 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 CCDC169A6NNP5 214 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 DCLK1O15075 740 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 EIF5BO60841 1220 aaKnown RBP17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 OAZ2O95190 189 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 CCDC192P0DO97 292 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 MCF2P10911 925 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 GUCY2FP51841 1108 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 YWHAHQ04917 246 aaPredicted RBP17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 MAPK7Q13164 816 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 ORC2Q13416 577 aaPredicted RBP17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 HAUS3Q68CZ6 603 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 RNF43Q68DV7 783 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 MPZL3Q6UWV2 235 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 ATAD1Q8NBU5 361 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 APPL2Q8NEU8 664 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 FAM200AQ8TCP9 573 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 KIFAP3Q92845 792 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 LPIN3Q9BQK8 851 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 MRPL4Q9BYD3 311 aaKnown RBP17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 HAPLN2Q9GZV7 340 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 DUSP15Q9H1R2 295 aaPredicted RBP17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 ATXN3LQ9H3M9 355 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 FBRSL1Q9HCM7 1045 aaKnown RBP17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 HPS4Q9NQG7 708 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 ARHGAP28Q9P2N2 729 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 MAFFQ9ULX9 164 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 FAM208BQ5VWN6 2430 aa17.02■□□□□ 0.32
AC243562.3-201ENST00000559866 ZNF638Q14966 1978 aaKnown RBP17.02■□□□□ 0.31
AC243562.3-201ENST00000559866 PPEF2O14830 753 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 OR52Z1P0C646 297 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 GABRR2P28476 465 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 NOVA1P51513 510 aaKnown RBP17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 EPHB3P54753 998 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 ST3GAL1Q11201 340 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 FOXC1Q12948 553 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 PLK5Q496M5 336 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 TRIM68Q6AZZ1 485 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 CENPPQ6IPU0 288 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 DNAJB7Q7Z6W7 309 aaPredicted RBP17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 SYNPOQ8N3V7 929 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 BPIFB1Q8TDL5 484 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 ZC3H10Q96K80 434 aaKnown RBP17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 HHIPQ96QV1 700 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 EDEM2Q9BV94 578 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 TMEM134Q9H6X4 195 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 IL21Q9HBE4 155 aa17.01■□□□□ 0.31
AC243562.3-201ENST00000559866 PTPRDP23468 1912 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 TCHHQ07283 1943 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 C4orf47A7E2U8 309 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms