RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 MPZL3Q6UWV2 235 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 THNSL1Q8IYQ7 743 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 SLCO2A1Q92959 643 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 KATNBL1Q9H079 304 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 C2orf40Q9H1Z8 148 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 SEMA4AQ9H3S1 761 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 RNPEPQ9H4A4 650 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 MINDY3Q9H8M7 445 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 MRPL47Q9HD33 250 aaKnown RBP11.75□□□□□ -0.53
SPG11-217ENST00000559511 VTA1Q9NP79 307 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 PARP2Q9UGN5 583 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 NOVA2Q9UNW9 492 aaKnown RBP11.75□□□□□ -0.53
SPG11-217ENST00000559511 R3HDM2Q9Y2K5 976 aaKnown RBP11.75□□□□□ -0.53
SPG11-217ENST00000559511 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.75□□□□□ -0.53
SPG11-217ENST00000559511 RRP15Q9Y3B9 282 aaKnown RBP11.75□□□□□ -0.53
SPG11-217ENST00000559511 IVNS1ABPQ9Y6Y0 642 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 INO80B-WBP1J3KQ70 363 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 ACKR2O00590 384 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 TLR3O15455 904 aaKnown RBP11.74□□□□□ -0.53
SPG11-217ENST00000559511 SNAI1O95863 264 aaPredicted RBP11.74□□□□□ -0.53
SPG11-217ENST00000559511 WEE2P0C1S8 567 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 IQCF3P0C7M6 154 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 RALAP11233 206 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 MMP8P22894 467 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 BRD2P25440 801 aaKnown RBP11.74□□□□□ -0.53
SPG11-217ENST00000559511 RPL7AP62424 266 aaKnown RBP11.74□□□□□ -0.53
SPG11-217ENST00000559511 KRT17Q04695 432 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 IFFO1Q0D2I5 559 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 KLF1Q13351 362 aaPredicted RBP11.74□□□□□ -0.53
SPG11-217ENST00000559511 ATF7IP2Q5U623 682 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 EEF1DP3Q658K8 133 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 EFCAB12Q6NXP0 572 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 SCARA5Q6ZMJ2 495 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 GPR142Q7Z601 462 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 ANKS1BQ7Z6G8 1248 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 ZNF467Q7Z7K2 595 aaPredicted RBP11.74□□□□□ -0.53
SPG11-217ENST00000559511 EXOC8Q8IYI6 725 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 TMEM130Q8N3G9 435 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 HEMGNQ9BXL5 484 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 INO80BQ9C086 356 aaPredicted RBP11.74□□□□□ -0.53
SPG11-217ENST00000559511 NIF3L1Q9GZT8 377 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 FZD8Q9H461 694 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 CISHQ9NSE2 258 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.74□□□□□ -0.53
SPG11-217ENST00000559511 SLC12A6Q9UHW9 1150 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 USTQ9Y2C2 406 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 TULP2O00295 520 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 PSTPIP1O43586 416 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 HBP1O60381 514 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 CAND2O75155 1236 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 TCF4P15884 667 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 FGFR4P22455 802 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 ADCYAP1R1P41586 468 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 ASPAP45381 313 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 EIF3BP55884 814 aaKnown RBP11.74□□□□□ -0.53
SPG11-217ENST00000559511 MAGOHP61326 146 aaKnown RBP11.74□□□□□ -0.53
SPG11-217ENST00000559511 MBTD1Q05BQ5 628 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 LAMC2Q13753 1193 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 SLC29A2Q14542 456 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 SGSM1Q2NKQ1 1148 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 ZNF568Q3ZCX4 644 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 DENND2CQ68D51 928 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 CCDC50Q8IVM0 306 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 RHOT1Q8IXI2 618 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 TMEM192Q8IY95 271 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.74□□□□□ -0.53
SPG11-217ENST00000559511 FEZF2Q8TBJ5 459 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 DCLK3Q9C098 648 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 XYLT2Q9H1B5 865 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 PARVAQ9NVD7 372 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 MTRF1LQ9UGC7 380 aaKnown RBP11.74□□□□□ -0.53
SPG11-217ENST00000559511 SCINQ9Y6U3 715 aa11.74□□□□□ -0.53
SPG11-217ENST00000559511 GH1P01241 217 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 LGALS2P05162 132 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 GJC1P36383 396 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 ZNF252P-AS1Q0IIN9 211 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 TRPC3Q13507 836 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 GRB14Q14449 540 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 SURF1Q15526 300 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 PTGISQ16647 500 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 ZNF699Q32M78 642 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 CST9Q5W186 159 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 KATNAL2Q8IYT4 538 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 TFAP2BQ92481 460 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 PARK7Q99497 189 aaKnown RBP11.73□□□□□ -0.53
SPG11-217ENST00000559511 FAM118BQ9BPY3 351 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 EPN3Q9H201 632 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 KLHL11Q9NVR0 708 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 ERAP1Q9NZ08 941 aa11.73□□□□□ -0.53
SPG11-217ENST00000559511 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.72□□□□□ -0.53
SPG11-217ENST00000559511 TCRBV5S1A1TA0A578 114 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 B4GALT4O60513 344 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 CSDE1O75534 798 aaKnown RBP11.72□□□□□ -0.53
SPG11-217ENST00000559511 C22orf31O95567 290 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 TMEM191BP0C7N4 346 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 CXCL8P10145 99 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 TMOD1P28289 359 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 SEC24CP53992 1094 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 PPP2R2AP63151 447 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 IGBP1P78318 339 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms