RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 CNTN6Q9UQ52 1028 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 DOCK5Q9H7D0 1870 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 DNALI1O14645 258 aaPredicted RBP17.56■□□□□ 0.4
SPG11-215ENST00000559193 ELF1P32519 619 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 KAZNQ674X7 775 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 SCARA3Q6AZY7 606 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 ABHD15Q6UXT9 468 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 SLITRK1Q96PX8 696 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 SLC9A2Q9UBY0 812 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 FAM47DPA6NHR8 397 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 KRT16P08779 473 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 POTEJP0CG39 1038 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 NOP14P78316 857 aaKnown RBP17.55■□□□□ 0.4
SPG11-215ENST00000559193 ZNF252P-AS1Q0IIN9 211 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 ACCSLQ4AC99 568 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 RNF43Q68DV7 783 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 TRABD2AQ86V40 505 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 ECHDC2Q86YB7 292 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 ANKRD35Q8N283 1001 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 TTLL6Q8N841 843 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 ASAP3Q8TDY4 903 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 TMEM143Q96AN5 459 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 KLHL29Q96CT2 875 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 PARVAQ9NVD7 372 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 ZNRF3Q9ULT6 936 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.55■□□□□ 0.4
SPG11-215ENST00000559193 KIAA1217Q5T5P2 1943 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 EXOC1LA0A1B0GW35 172 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 ETS1P14921 441 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 FASTKD3Q14CZ7 662 aaKnown RBP17.55■□□□□ 0.4
SPG11-215ENST00000559193 TLDC1Q6P9B6 456 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 MFSD7Q6UXD7 560 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 FAM47EQ6ZV65 393 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 ASRGL1Q7L266 308 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 OR5B17Q8NGF7 314 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 N4BP2L2Q92802 583 aaPredicted RBP17.55■□□□□ 0.4
SPG11-215ENST00000559193 STAMBPL1Q96FJ0 436 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 CFAP57Q96MR6 1250 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 CGRRF1Q99675 332 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 MYOZ2Q9NPC6 264 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 ARHGEF3Q9NR81 526 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 IP6K2Q9UHH9 426 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 TRIM33Q9UPN9 1127 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 PARP14Q460N5 1801 aa17.55■□□□□ 0.4
SPG11-215ENST00000559193 KRT1P04264 644 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 EDN1P05305 212 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 PECAM1P16284 738 aaPredicted RBP17.54■□□□□ 0.4
SPG11-215ENST00000559193 LMNB2Q03252 620 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 EAPPQ56P03 285 aaPredicted RBP17.54■□□□□ 0.4
SPG11-215ENST00000559193 AGAP11Q8TF27 550 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 RBM41Q96IZ5 413 aaKnown RBP17.54■□□□□ 0.4
SPG11-215ENST00000559193 KLHL14Q9P2G3 628 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 HGSO14964 777 aaPredicted RBP17.54■□□□□ 0.4
SPG11-215ENST00000559193 SPAG7O75391 227 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 ASMTLO95671 621 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 PIGRP01833 764 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 ATF7P17544 494 aaPredicted RBP17.54■□□□□ 0.4
SPG11-215ENST00000559193 MMP8P22894 467 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 ABCD1P33897 745 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 POLGP54098 1239 aaPredicted RBP17.54■□□□□ 0.4
SPG11-215ENST00000559193 IL9RQ01113 521 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 ACVR2BQ13705 512 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 CCDC142Q17RM4 750 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 XKR3Q5GH77 459 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 DRICH1Q6PGQ1 229 aaPredicted RBP17.54■□□□□ 0.4
SPG11-215ENST00000559193 CEP128Q6ZU80 1094 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 RCOR2Q8IZ40 523 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 ALLCQ8N6M5 410 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 REPS2Q8NFH8 660 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 NSUN6Q8TEA1 469 aaKnown RBP17.54■□□□□ 0.4
SPG11-215ENST00000559193 PRCCQ92733 491 aaPredicted RBP17.54■□□□□ 0.4
SPG11-215ENST00000559193 ZNF148Q9UQR1 794 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 L3MBTL1Q9Y468 752 aa17.54■□□□□ 0.4
SPG11-215ENST00000559193 CNTNAP2Q9UHC6 1331 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 TMEM191CA6NGB0 347 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 A8MUI8 341 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 TMEM191BP0C7N4 346 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 GLRA2P23416 452 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 TBXAS1P24557 533 aaPredicted RBP17.53■□□□□ 0.4
SPG11-215ENST00000559193 ARSEP51690 589 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 ZNF132P52740 706 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 CXCL9Q07325 125 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 SNRNP48Q6IEG0 339 aaKnown RBP17.53■□□□□ 0.4
SPG11-215ENST00000559193 NIM1KQ8IY84 436 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 CCHCR1Q8TD31 782 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 ZNF526Q8TF50 670 aaPredicted RBP17.53■□□□□ 0.4
SPG11-215ENST00000559193 GRAMD1AQ96CP6 724 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 TARS2Q9BW92 718 aaKnown RBP17.53■□□□□ 0.4
SPG11-215ENST00000559193 PITPNM3Q9BZ71 974 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 EBF2Q9HAK2 575 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 KIF9Q9HAQ2 790 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 ANKFY1Q9P2R3 1169 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 IVNS1ABPQ9Y6Y0 642 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 ATP4AP20648 1035 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 CETN2P41208 172 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 HP1BP3Q5SSJ5 553 aaPredicted RBP17.53■□□□□ 0.4
SPG11-215ENST00000559193 ZFYVE27Q5T4F4 411 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 TDRPQ86YL5 185 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 UBR7Q8N806 425 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 DENND1AQ8TEH3 1009 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms