RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CLDND1Q9NY35 253 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 STK39Q9UEW8 545 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 FBXL5Q9UKA1 691 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 POLIQ9UNA4 740 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 BACE2Q9Y5Z0 518 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 WDR27A2RRH5 827 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 H3BQ06 376 aaPredicted RBP12.31□□□□□ -0.44
SNX1-204ENST00000559061 CYB561D2O14569 222 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 IKBKBO14920 756 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 TGM5O43548 720 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 STAU1O95793 577 aaKnown RBP12.31□□□□□ -0.44
SNX1-204ENST00000559061 TNNC2P02585 160 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 KRT19P08727 400 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 OR4Q2P0C623 313 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 ROR1Q01973 937 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 STIM1Q13586 685 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 SPOPLQ6IQ16 392 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 FILIP1Q7Z7B0 1213 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 TRIM59Q8IWR1 403 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.31□□□□□ -0.44
SNX1-204ENST00000559061 HPDLQ96IR7 371 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 ZNF560Q96MR9 790 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 PI4K2AQ9BTU6 479 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 SRRTQ9BXP5 876 aaKnown RBP12.31□□□□□ -0.44
SNX1-204ENST00000559061 S1PR5Q9H228 398 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 CRISPLD1Q9H336 500 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 VRTNQ9H8Y1 702 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 FBXW11Q9UKB1 542 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 CDY1Q9Y6F8 540 aa12.31□□□□□ -0.44
SNX1-204ENST00000559061 BICDL2A1A5D9 508 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 GRXCR2A6NFK2 248 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 TULP1O00294 542 aaPredicted RBP12.3□□□□□ -0.44
SNX1-204ENST00000559061 GABRDO14764 452 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 TRAPPC3O43617 180 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 ABLIM3O94929 683 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 ASS1P00966 412 aaKnown RBP12.3□□□□□ -0.44
SNX1-204ENST00000559061 HLA-DRAP01903 254 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 SPATA31D3P0C874 917 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 EPB41P11171 864 aaKnown RBP12.3□□□□□ -0.44
SNX1-204ENST00000559061 KCNA5P22460 613 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 OR1D2P34982 312 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 CA8P35219 290 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 NDUFV1P49821 464 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 KCNQ1P51787 676 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 NCOA4Q13772 614 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 RAB33AQ14088 237 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 NCAPHQ15003 741 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 SV2CQ496J9 727 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 KIAA1841Q6NSI8 718 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 ANKRD54Q6NXT1 300 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 DSTYKQ6XUX3 929 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 SPATA31D4Q6ZUB0 917 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 ANKS3Q6ZW76 656 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 FRMD5Q7Z6J6 570 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 LRRTM3Q86VH5 581 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 PALB2Q86YC2 1186 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 C12orf76Q8N812 135 aaPredicted RBP12.3□□□□□ -0.44
SNX1-204ENST00000559061 MRPL45Q9BRJ2 306 aaKnown RBP12.3□□□□□ -0.44
SNX1-204ENST00000559061 EMILIN2Q9BXX0 1053 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 SMYD3Q9H7B4 428 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 TMEM8AQ9HCN3 771 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNX1-204ENST00000559061 TMLHEQ9NVH6 421 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 SNX9Q9Y5X1 595 aa12.3□□□□□ -0.44
SNX1-204ENST00000559061 TCF20Q9UGU0 1960 aaKnown RBP12.3□□□□□ -0.44
SNX1-204ENST00000559061 NRG2O14511 850 aaPredicted RBP12.29□□□□□ -0.44
SNX1-204ENST00000559061 SEC24AO95486 1093 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 ADH1AP07327 375 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 ODC1P11926 461 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 KLRC2P26717 231 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 ERCC5P28715 1186 aaPredicted RBP12.29□□□□□ -0.44
SNX1-204ENST00000559061 PNPLA4P41247 253 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 ASPAP45381 313 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 RAP1GAPP47736 663 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 CDR1P51861 262 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 YWHAHQ04917 246 aaPredicted RBP12.29□□□□□ -0.44
SNX1-204ENST00000559061 TYRO3Q06418 890 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 SKIV2LQ15477 1246 aaKnown RBP12.29□□□□□ -0.44
SNX1-204ENST00000559061 NFKBIBQ15653 356 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 CLUL1Q15846 466 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 LEXMQ3ZCV2 418 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 CTXN3Q4LDR2 81 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
SNX1-204ENST00000559061 OVOS1Q6IE37 1185 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 RNF19BQ6ZMZ0 732 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 TTC9BQ8N6N2 239 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 TOP6BLQ8N6T0 577 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 SMRP1Q8NCR6 262 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 LMO3Q8TAP4 145 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 HLA-CQ95604 372 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 ZNF707Q96C28 371 aaPredicted RBP12.29□□□□□ -0.44
SNX1-204ENST00000559061 ZCWPW1Q9H0M4 648 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 DNAJC25Q9H1X3 360 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 MMRN2Q9H8L6 949 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.29□□□□□ -0.442e-12■■■■■ 298.1
SNX1-204ENST00000559061 MAN1C1Q9NR34 630 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 ARMCX3Q9UH62 379 aaPredicted RBP12.29□□□□□ -0.44
SNX1-204ENST00000559061 SSX2IPQ9Y2D8 614 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 COQ4Q9Y3A0 265 aa12.29□□□□□ -0.44
SNX1-204ENST00000559061 RFPL2O75678 378 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms